Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01911 ATGATAACTTGGGGCGATCTCTACACCGTTTTAGCAGCAGTTGTTCCACTTTACGTAGCCATGATTTTAGCCTACGGTTCCGTACGGTGGTGGAAAATATTCTCACCGGACCAATGTTCCGGCATAAACCGTTTCGTCGCGATTTTCGCAGTTCCACTTCTTTCTTTTCACTTCATCTCAACAAATAATCCTTATGCTATGAACTTCAGGTTCATAGCTGCAGATACACTTCAAAAAATTATCATGTTATTTGCACTTGCAATTTGGACTAATTTCTCTGCTAATGGAAGTTTAGAGTGGATGATCACAATTTTTTCTCTTTCAACTTTACCAAATACTTTGGTTATGGGAATTCCACTTCTTATTGCTATGTATGGTGAATATTCTGGTACACTTATGGTTCAAATTGTTGTTCTTCAGTGTATCATTTGGTATACACTGTTATTGTTTCTCTTTGAGTACCGTGGTGCTAAGCTTCTAATTATGGAACAGTTTCCTGAAACTGCTGCTTCTATTGTTTCGTTTAAGGTTGATTCTGATGTTGTTTCGCTTGATGGAAGGGATTTTCTTGAAACTGATGCTGAGGTTGGTGATGATGGTAAGCTTCATGTTACTGTTAGAAAATCTAATGCTTCACGGAGATCTTTTATGATGACTCCCCGACCGTCGAATCTCACTGGAGCTGAGATTTATAGTTTGAGCTCTTCACGGAATCCGACGCCGAGGGGTTCCAATTTTAATCATACTGATTTTTACTCTATGATGGGTTATGCGCCGAGACATTCCAATTTTGGTGCTGCTGATGTGTATTCGGTTCAGTCCAATTCGCGCGGTCCAACACCACGGCCGTCAAATTTTGAAGAGAATCCTGCGCCGGCGACAGTGCCACCAGCGCAGGCAACAAGTTCTCCGAGGTTTGGGTTTTATCCGGCACAGAATGTGACGGCAGCTTATCCAGCTCCCAACCCGGAATTTGCTTCCGGGTTGAGCAAGAGTGTTAGCAAAAATTCTCAACAACAGTTATCCTTATCCCAGCAACAGACAGAGAAATTGGTTCAGCCACAACCGCAAATAGTTACTAATAATGGTGCTCTTGCTAAAACAAGTAGCGATGCTAAAGAGCTTCACATGTTTGTGTGGAGCTCTAGTGCTTCGCCGGTTTCTGAAGCCAGTGGGCTTCAGGTCTTCGGCAGCGGTGCTGCTGATTACGGAGCGTCCGATCAATCTGGACGCTCTGATCAGGGTGCTAAGGAGATTAGAATGTTGGTTCCAGATGATCATCCTCCAAATGGTGTTACAAATAAAGAAACAGAGTTTGGTGGGGAAGAGTTAAAGTTTCCATTGAAAGAAGAAGAACTTCTTGTAGAAGAAGATCAGGTTGAGAAAGTGGAACCGGCTGGTCTGAACAAGCTAGGGTCCAGTTCAACGACGGAGCTACACCCGCCAGCCACCGAAGCAGCCACCGTAAAACACATGCCTCCGGCAAGTGTTATGACCAGACTCATACTGATCATGGTTTGGCGGAAGCTTATTCGCAACCCAAACACATATTCCAGCCTCATTGGTGTCATTTGGTCCCTAATAGCATTTAGGTGGCATGTGCATATGCCCAAAATAATAGAGAAATCAATCTCCATACTGTCTGATGCTGGTCTTGGAATGGCTATGTTCAGTTTAGGTTTGTTTATGGCTTTACAACCTAAGATGATTGCTTGTGGGAACTCGGTTGCTTCGTTCGCCATGGCTGTTCGATTTCTTACAGGTCCTGCAGTCATGGCAGCAGCTTCCATTGCTGTTGGCTTGCGCGGAAACCTTCTACGTGTAGCTATTGTTCAGGCTGCACTTCCTCAAGGGATTGTTCCATTTGTGTTTGCCAAGGAGTACAATGTCCATCCAGCCATTCTTAGTACAGGGGTTATATTTGGGATGTTGATAGCACTACCAATTACATTAGTGTACTACATATTACTTGGTTTGTAA 1980 0.4374 MITWGDLYTVLAAVVPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFISTNNPYAMNFRFIAADTLQKIIMLFALAIWTNFSANGSLEWMITIFSLSTLPNTLVMGIPLLIAMYGEYSGTLMVQIVVLQCIIWYTLLLFLFEYRGAKLLIMEQFPETAASIVSFKVDSDVVSLDGRDFLETDAEVGDDGKLHVTVRKSNASRRSFMMTPRPSNLTGAEIYSLSSSRNPTPRGSNFNHTDFYSMMGYAPRHSNFGAADVYSVQSNSRGPTPRPSNFEENPAPATVPPAQATSSPRFGFYPAQNVTAAYPAPNPEFASGLSKSVSKNSQQQLSLSQQQTEKLVQPQPQIVTNNGALAKTSSDAKELHMFVWSSSASPVSEASGLQVFGSGAADYGASDQSGRSDQGAKEIRMLVPDDHPPNGVTNKETEFGGEELKFPLKEEELLVEEDQVEKVEPAGLNKLGSSSTTELHPPATEAATVKHMPPASVMTRLILIMVWRKLIRNPNTYSSLIGVIWSLIAFRWHVHMPKIIEKSISILSDAGLGMAMFSLGLFMALQPKMIACGNSVASFAMAVRFLTGPAVMAAASIAVGLRGNLLRVAIVQAALPQGIVPFVFAKEYNVHPAILSTGVIFGMLIALPITLVYYILLGL 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01911 659 NCBIfam auxin efflux carrier 1 659 IPR014024 -
Trre7g01911 659 Pfam Membrane transport protein 9 654 IPR004776 GO:0016020|GO:0055085
Trre7g01911 659 MobiDBLite consensus disorder prediction 326 349 - -
Trre7g01911 659 MobiDBLite consensus disorder prediction 327 349 - -
Trre7g01911 659 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 659 - -
Trre7g01911 659 MobiDBLite consensus disorder prediction 271 306 - -
Trre7g01911 659 MobiDBLite consensus disorder prediction 468 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01911 Trre-Chr7 15012916 15016713 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01911 1 659 Organic Solute Cotransporters AT1G70940 74.041 0.0 935
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01911 K13947 - gmx:100802247 1050.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g01911 7 15012916 15016713 Trre7g01911 7 15012916 15016713 ECH