Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01700 ATGGACGACGAATTGCTCGAGTTACAGCGACAGTTCGAGTTCGCCCAACAAGCAAAATCAAGTATCCGATTATCCGATCGAAACGTCGTCGAATTAGTCCAAAAATTGCAACAACTTCAAATCATCGATTTCGAACTTCTTCATACTGCTTCCGGCAAAGAATACATCACTCTCGATCAACTGAGAAATGAGATGATTGCTGAGGTGAAAAAATTAGGGCGAATTTCTGTGATTGATCTTGCTGATGTTACTGGAGTTGACTTGTATTATGTTGAGAAATTAGCTCAGAATATTGTAACGGATCATGGAGAATTGATGTTGACTCAAGGGGAAATTATTACGGAATCTTACTGGGACTCAATTGCGGAAGAGATTAATGAGAGGCTTCAAGAATGTAGTCAGATTGCATTGACGGAACTCGCAGCACAGTTGAATGTTGGTTTGGATTTGATTGCTTCTGTGTTGGAGCCGCGCCTTGGAACTATAGTGAAAGGAAGGCTTGAAGGTGGACAGCTGTATACTCCTGCTTATGTTGCTCGTGTTAGTGCCATGGTTCGTGGTGCTGCGAGGGGTATCACGGTTCCGACAAATTTGACAGTGTTATGGAGCTCGTTGCAGAATTTACTGCAAGAAATGGATGGAGCTAGTGGTGTGGCTGTTGATGGATCTTTCTTCCAGTCTTTGTTTAATGGACTTGTGAAGGGAGGGGAGATTTTAGGGTCTGTTCGTGCTGGAGTGCATTGGACACCAGCTGTATTTGCTGTTGCTCAAAAGGAATCTGTGGATTCATTCTTTTCACAAAATTCTTTCATCAGCTATGATGTTCTGCAAAAACTTGGAATTCCCCAGCCCATTCAATTCTTGCAGTCCAGATATCCTGAAGGAAAACCTCTTGTTACGACATTTGTTCATCCGTCGATGATTGAGATGCTAGATGCTGCTATTGAGGATGCTCTAGAACGTGGTAGCTGGAGCGATTCTCTTTCCTTATTGCCCTCATCTTTTACACCTCAAGATGCATCTAAAATGTTGTTCCTCTGTCAATCTGTACAATTGGCTCTTAAGTCTAACAAAGCACACATATTTGGGGACATTTATGTGTTGAGCAGCAGCTTTATGAAGGACATTTGTGATCGCATAGTGAAAGAATTAGAGACATTAGCTATTTCAAGGTCTTTGGGCATTGCAAAACCTGGTGATTTACCTATAGCCAATGAAGTAAAAGCAGGGTATGATTCAAGCAGGTTGAGTGAGTCCAGCGAAATGGCGAGTGATGGTGGTTCCAACAAGCATGCTGATAAAGGGTCAAAGAAGAAAAAGGGAAAAGCTGCTGGAAATGCATTAGCAAATCAATCTGAAAGTGGTCCTGATAAACAAGAACATACTTCCACAAAATCTAAGAAAAACCAGAGGAGGGGTAAGGATACATCTTCACAAACATTAGACTCAAAGTCAGGTTCTAGGAAAGAATCACTTAAAATGAAAGAGGATGATCTCAGTAGTCCCTCAGAAGAATGGATCATGGAGAAGATTACAGCCTTGATTCCTGATTTTGAAGAACAAGGTCTTGATGATCCTGAAACGATCCTTAGGCCTTTGGCTAACAAGTTAAGGCCTACAATAATCAATACTTGGATGGAGAAAAAGAAGGCATTGTTTAAAGACAATGCAGAAAGAATGAAACAATTGCTTGATAATTTGCAAAAGAAACTTGATGAGTCTTTCTTAAACATGCAGCTGTATGAAAAAGCCTTAGAATTGTTTGAAGATGATCAATCAACTTCTGTTGTTTTGCATAGACATTTACTAAGGACAGTAGCAGCTCCTATGGTTGATATGCTTCTTCATGACTTGGACGAGCACAACAAATTAAAGAACGGAGTTGAAGTGCAGGAATCTCCAAATTCTGAGTCTATTTCGTTTAGTCCTGGAGATAGAGCTGCAATTTCCAAGAGTTTTCCAGGACCTCTTGCAAATAAGGCTCTTGCTGTTGTAGAAGCATTGGAAGGAAAGAGAGTGGAAACATTCATGTCTGCATTCAGAACTGTGACAGAAGAGAGTGGGTTGCCTTTGAAAAAGCTTGACAAGAAACTAGAAAGAACACTTCTACATTCATATCGGAAGGAATTGACATCTCAAGTTTCGGCTGAGACTGACCCTGTATCACTTCTACCAAAAGTTGTGTCTTTACTCTATGTCCAGGTTCATCATAAAGCTCTTCAAGCTCCTGGAAGGGCCATTTCGGTTGCTATTTCTCACTTGAAGGATAAGCTAGACGAGTCAGCATGCAAGATTTTAGCTGATTATCAAACTGCCACTGTGACTCTTTTAGCACTATTATCAGCTGCTCCTGACGATGAAAACAGTTGTGCATCTGATAGAATTGTGAGTAAAAGAGAGCTTCTCGAGAGCCAAATGCCAGCTTTAAAAAACTTGGTTTTGACCACTTCACAACAGTCATAA 2463 0.408 MDDELLELQRQFEFAQQAKSSIRLSDRNVVELVQKLQQLQIIDFELLHTASGKEYITLDQLRNEMIAEVKKLGRISVIDLADVTGVDLYYVEKLAQNIVTDHGELMLTQGEIITESYWDSIAEEINERLQECSQIALTELAAQLNVGLDLIASVLEPRLGTIVKGRLEGGQLYTPAYVARVSAMVRGAARGITVPTNLTVLWSSLQNLLQEMDGASGVAVDGSFFQSLFNGLVKGGEILGSVRAGVHWTPAVFAVAQKESVDSFFSQNSFISYDVLQKLGIPQPIQFLQSRYPEGKPLVTTFVHPSMIEMLDAAIEDALERGSWSDSLSLLPSSFTPQDASKMLFLCQSVQLALKSNKAHIFGDIYVLSSSFMKDICDRIVKELETLAISRSLGIAKPGDLPIANEVKAGYDSSRLSESSEMASDGGSNKHADKGSKKKKGKAAGNALANQSESGPDKQEHTSTKSKKNQRRGKDTSSQTLDSKSGSRKESLKMKEDDLSSPSEEWIMEKITALIPDFEEQGLDDPETILRPLANKLRPTIINTWMEKKKALFKDNAERMKQLLDNLQKKLDESFLNMQLYEKALELFEDDQSTSVVLHRHLLRTVAAPMVDMLLHDLDEHNKLKNGVEVQESPNSESISFSPGDRAAISKSFPGPLANKALAVVEALEGKRVETFMSAFRTVTEESGLPLKKLDKKLERTLLHSYRKELTSQVSAETDPVSLLPKVVSLLYVQVHHKALQAPGRAISVAISHLKDKLDESACKILADYQTATVTLLALLSAAPDDENSCASDRIVSKRELLESQMPALKNLVLTTSQQS 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01700 820 MobiDBLite consensus disorder prediction 486 503 - -
Trre7g01700 820 MobiDBLite consensus disorder prediction 415 503 - -
Trre7g01700 820 Pfam E3 UFM1-protein ligase 1 4 288 IPR018611 GO:0061666|GO:0071569
Trre7g01700 820 MobiDBLite consensus disorder prediction 458 478 - -
Trre7g01700 820 Coils Coil 550 584 - -
Trre7g01700 820 PANTHER E3 UFM1-PROTEIN LIGASE 1 2 819 IPR018611 GO:0061666|GO:0071569
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01700 Trre-Chr7 13091210 13098289 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01700 1 783 EF-hand Containing Proteins AT3G46220 62.770 0.0 971
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01700 K22755 - gmx:100808087 1280
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g01700 7 13091210 13098289 Trre7g01700 7 13091210 13098289 ECH