Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01699 ATGTCGGGGTTTCTTAATTCTTCTCTGAATGGATCTGCTTCAAATCTTCCAGATGGTGCTGGACGGTCTTTTGCCACGTCTTTCTCTAGTCAGTCTGGTGCAGCCTCACCAATTTTTCATCACACTGGAGGTATTCAAGGGTTGCACAGTATTCATGGGAGCTTTAATGTTCCCAACATGTCCGGAACTCTCACACCAAGAAACTCCACAGTAAATAATGTTCCGTCTGGGGGTGTTCAACAACAAACAGGAAGCCTTTCAAGTGGAAGATTTGCATCCAACAATCTTCCTGTTGCATTATCACAGCTATCTCATGGAAGTTCATATGGACATTCAGGAGTCACCAACAGAGGAGGTACAAGTGTTGTAGGAAACCTTGGATTTAGTAGTAGTACAAATGGAGTTGGTGGTTCTATTCCTGGGTTTCCTGCATCTATTGGAAATCGAAATGCTGTACCAGGATTGGGAGTATCCCCGATTTCGGGAAATGCAGGCCCTCGAATCACTAGTTCTTTGGGAAATATGGTTGGTGGGGGGAATATTGGAAGGACTGGTGGAGGATTGTCTATGCCTGGTCTTGGTTCTCGTTTAAATTTGAGTGCAAACAGTGGATCTGGTGGTTTAGGCATGCAAGGACAGAATCGATTGATGAGTAGTGTGCTTCCACAAGGATCTCCACAGGTGATTTCAATGCCTGGGAATTCATATCCCAGTGCTGGAGGCCCGTTTTCCCAAAGTCACATTCATGCAGTAAATAACTTGAACACTATGAGGATGTTCAATGATGTAAATTCCAATGATAGTTCGCCTTTGGACCCAAATGAGTTCCCTCAACTGACAAGCCGTCCTAGTTCTGCTGGAGGATCTCAAGGGCAGCTGGGTTCTTTACGGAATCAGGGTCTTGGCGTTAGTCCTATTGGTCAACAAAACCATGAGTTTAGCATTCAGAGTGAAGACTTCCCTGCATTACCAGGATTCAAAGGTGGTGTTAATGCAGATTATGCAATGGATATGCACCAGAAAGAACAACATCATGACAATGCTGTGCCAATGATGCAATCTCAGCATTTCTCTATGGGGAGGTCTGCTGGGCTCAGTTTGGGGGGAACATATTCCTCCCACCGAACCCAACCGCAACATAATCCTTCAGTCAGTAGTGGCAGTGTCTCGTTCTCATCTGTAAATAACCAGGATCTTCTCCATCAACATGGATCAGATATTTTTCCATCTTCTCATTCTGCCTATCATCCACAGACCAGTGGACCTCCTGGAATTGGATCTAGGCCTTCGAGTTCTCCAAATACAGTTTCTGGTATGGGTTCATACGACCAGCTCATCCAGCAATATCAACAGCATAAGAACCAATCCCAATTTCATCTTCAAATGCCGTCTCTAAATCAGTCTTTTAGGGACCAGGACATGAAGTCTATGCAAGCTGCACAATCTACACCAGATCCATATGGGTTGCTTGGCCTGTTAAGTGTAATCAGGATGAATGATCTTGACCTGGCATCTCTTGCTCTTGGAATTGATCTTACCACACTTGGCTTAAATTTGAATTCATCAGAAAATCTTCACAAGACTTTTAAATCTCCATGGGCAGAAGAACCAGCTAAGGGTGATCCAGAGTTTAATGTGCCACAATGTTATTATACTGAACAACCACCTGCTTTAAATCATCTTTATTTTTCAAAGTTTTCGCTGGAAACATTGTTTTACATATTTTACAGCATGCCGAAAGACAAAGCACAATTATACGCTGCAAATGAGCTTAACAGAAGAAAATGGTATTACCACACAGAGTATCAATTGTGGTTTTCGAGAGCACCCAATGTGGAGCCACTGGTGAAAACAAACACATACGAGAGAGGAACTTATCACTGTTTTGATCCAAGCTCTTTTGAAACGGTCCGCAAGGATAATGTTATTCTCCAATATGAAAAGCTGGAAAGGTCTCAACATTAA 1965 0.431 MSGFLNSSLNGSASNLPDGAGRSFATSFSSQSGAASPIFHHTGGIQGLHSIHGSFNVPNMSGTLTPRNSTVNNVPSGGVQQQTGSLSSGRFASNNLPVALSQLSHGSSYGHSGVTNRGGTSVVGNLGFSSSTNGVGGSIPGFPASIGNRNAVPGLGVSPISGNAGPRITSSLGNMVGGGNIGRTGGGLSMPGLGSRLNLSANSGSGGLGMQGQNRLMSSVLPQGSPQVISMPGNSYPSAGGPFSQSHIHAVNNLNTMRMFNDVNSNDSSPLDPNEFPQLTSRPSSAGGSQGQLGSLRNQGLGVSPIGQQNHEFSIQSEDFPALPGFKGGVNADYAMDMHQKEQHHDNAVPMMQSQHFSMGRSAGLSLGGTYSSHRTQPQHNPSVSSGSVSFSSVNNQDLLHQHGSDIFPSSHSAYHPQTSGPPGIGSRPSSSPNTVSGMGSYDQLIQQYQQHKNQSQFHLQMPSLNQSFRDQDMKSMQAAQSTPDPYGLLGLLSVIRMNDLDLASLALGIDLTTLGLNLNSSENLHKTFKSPWAEEPAKGDPEFNVPQCYYTEQPPALNHLYFSKFSLETLFYIFYSMPKDKAQLYAANELNRRKWYYHTEYQLWFSRAPNVEPLVKTNTYERGTYHCFDPSSFETVRKDNVILQYEKLERSQH 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01699 654 Pfam NOT2 / NOT3 / NOT5 family 527 649 IPR007282 GO:0006355
Trre7g01699 654 Gene3D - 477 654 IPR038635 -
Trre7g01699 654 MobiDBLite consensus disorder prediction 59 86 - -
Trre7g01699 654 PANTHER CCR4 NOT-RELATED 48 651 IPR040168 GO:0030015
Trre7g01699 654 MobiDBLite consensus disorder prediction 361 440 - -
Trre7g01699 654 MobiDBLite consensus disorder prediction 261 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01699 Trre-Chr7 13083126 13089172 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01699 K12605 - gmx:100807026 1026.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g01699 7 13083126 13089172 Trre7g01699 7 13083126 13089172 ECH