Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01668 ATGGCATCATCACGAATCATATCCCATTCTCCACCAAATCTCCACCGTCAACCTCCCCCTTTTGACTCCGTTAAACCTCTTCCACCTCAAAATCTCAATCTCCACCCAAAACGACACCGTAACCTCCGCATTCACACTTCCCTTCGTAGTGGTCAAAGAGATAACGACCTCAACGACACCGTCAATTTGCGAACAAATTCCGTCTCCGCTGTCTCAAACGACGTCGTTTCCAAAGATCCGATCTCTCTTCCTCGTCCTTTATCTTCGAATCAATCATCCAGTGCTGTTTCCGATGGTTCACGACTTCGTGTTGCATATCAGGGAGTTCGTGGTGCTTACAGTGAATCTGCAGCACAAAAGGCCTACCCTAATTGTGAAGCTGTTCCTTGTGAACAATTCGACACCGCTTTTGAAGCTGTAGAAAGGTGGCTTGTGGACAGAGCAGTTTTGCCAATTGAGAATTCTTTGGGAGGTAGCATTCACAGAAATTATGACCTTTTACTCAGGCACAGACTACATATAGTAGGAGAAGTAAAATATGCAGTCCATCATTGTTTGATGGCCAACCATGGTGTTAAACTTGAGAATTTGAAGCGTGTTCTTAGTCATCCTCAGGCTCTTGCACAATGTGAGAACACCTTGACTGGGTGGGGATTAGTTAGAGAAGCAGTTGATGATACAGCCGGTGCTGCAAAGCATGTTGCCCTCCATAACCTACAAGATGCAGGAGCTGTTGCTAGCTCTGCTGCTGCAGAGATCTATGGCTTAAATATACTTGCTCAAGACATACAGGATGATAGTGATAATGTCACCCGGTTTTTAGTGTTGGCACGAGAACCTATACTTCCAGGCATAGACAGGCCATTTAAGACAAGCATAGTTTTTTCTTTAGAAGAGGGTCCTGGGATACTTTTCAAGGCCCTTGCTGTTTTTGCCCTGCGCCAAATTAATCTTTCCAAGATTGAAAGTCGTCCTTTGCGGAAGCAACCTCTAAGAACATCCGATGATAATAGCAATAGGTACTTTGATTATCTTTTCTATGTTGATTTTGAAGCATCAATGGCTGATCATAATGCACAAAATGCCTTAAGGCATCTAAAGGAGTTTGCTACATTCTTGCGAGTGCTAGGGAGTTATCCTATGGACATTAGCATGGCATAA 1161 0.4393 MASSRIISHSPPNLHRQPPPFDSVKPLPPQNLNLHPKRHRNLRIHTSLRSGQRDNDLNDTVNLRTNSVSAVSNDVVSKDPISLPRPLSSNQSSSAVSDGSRLRVAYQGVRGAYSESAAQKAYPNCEAVPCEQFDTAFEAVERWLVDRAVLPIENSLGGSIHRNYDLLLRHRLHIVGEVKYAVHHCLMANHGVKLENLKRVLSHPQALAQCENTLTGWGLVREAVDDTAGAAKHVALHNLQDAGAVASSAAAEIYGLNILAQDIQDDSDNVTRFLVLAREPILPGIDRPFKTSIVFSLEEGPGILFKALAVFALRQINLSKIESRPLRKQPLRTSDDNSNRYFDYLFYVDFEASMADHNAQNALRHLKEFATFLRVLGSYPMDISMA 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01668 386 Pfam Prephenate dehydratase 104 280 IPR001086 GO:0004664|GO:0009094
Trre7g01668 386 ProSiteProfiles Prephenate dehydratase domain profile. 103 278 IPR001086 GO:0004664|GO:0009094
Trre7g01668 386 CDD ACT_CM-PDT 290 380 - -
Trre7g01668 386 Gene3D - 97 186 - -
Trre7g01668 386 PANTHER PREPHENATE DEHYDRATASE P PROTEIN 63 384 - -
Trre7g01668 386 Gene3D - 286 382 - -
Trre7g01668 386 ProSitePatterns Prephenate dehydratase signature 1. 254 276 IPR018528 GO:0004664|GO:0009094
Trre7g01668 386 ProSitePatterns Prephenate dehydratase signature 2. 318 325 IPR018528 GO:0004664|GO:0009094
Trre7g01668 386 FunFam Arogenate dehydratase 98 185 - -
Trre7g01668 386 CDD PBP2_Ct-PDT_like 103 280 - -
Trre7g01668 386 FunFam Arogenate dehydratase 285 383 - -
Trre7g01668 386 SUPERFAMILY Periplasmic binding protein-like II 103 283 - -
Trre7g01668 386 Gene3D - 187 266 - -
Trre7g01668 386 FunFam Arogenate dehydratase 186 266 - -
Trre7g01668 386 ProSiteProfiles ACT domain profile. 292 380 IPR002912 -
Trre7g01668 386 MobiDBLite consensus disorder prediction 1 60 - -
Trre7g01668 386 SUPERFAMILY ACT-like 273 382 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01668 Trre-Chr7 12821441 12825033 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01668 K05359 - gmx:100787387 586.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g01668 7 12821441 12825033 Trre7g01668 7 12821441 12825033 ECH