Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01662 ATGAGAACAAGTAACCACTTAATTGGAGTACTAAACTTCCTAACATTTTTACTCTCAATACCAATCCTAGGTGGTGGAATATGGCTAAGTAGCAGAGCAAACAACACAGATTGTTTAAAATTCCTTCAATGGCCATTAATCATAATTGGTATAAGCATCATGGTTGTTTCATTAGCCGGTTTCGCCGGAGCGTGTTATCGTAACACGTTTCTTTTACGTTTCTACCTTGTTGTCATGTTCTTAATTATTGCAGTACTTATTGGTTTCATAATATTTGCTTATGTTGTAACGGATAAAGGAGAAGGAAGAAGGTTGATTAATAGAGGTTATTTGGATTATTATTTGGATGATTATTCTGGTTGGTTAGAGGAACGTGTTAAGAGTGATCAATATTGGGGGAAGATTAGTTCTTGTATTAGAGATTCTAAAACTTGTAGGAAATTAGCTAGGAATTTTAATGGTGTTCCTGAGACTTCTGATATGTTCTTTCAAAGAAAACTTGCTCCTATTCAGTCTGGTTGCTGCAAGCCTCCAACAGATTGTGGCTATATATATCAAAATGAAACAGTATGGATCCAAGGAGCAGGACTAATGGGAAACAATCCTGACTGCATTAAATGGAACAATGACCAACAACAGCTTTGTTATGACTGTGATTCTTGCAAAGCTGGTGTACTTGGTAGTCTCAAGAAAAGTTGGAGAAAAGTTTCAGTGATCAATATTGTTGTCATGATTATCCTTGTAATTGTTTACATAATTGCTTATTATGCTTATAGAAACAACAAAAGGATGGATAATGATGAACCTTATGGTGAAGCAAGAATGACCAAGTCACAACCTAGTGCTTTTCATCTTTGA 858 0.3531 MRTSNHLIGVLNFLTFLLSIPILGGGIWLSSRANNTDCLKFLQWPLIIIGISIMVVSLAGFAGACYRNTFLLRFYLVVMFLIIAVLIGFIIFAYVVTDKGEGRRLINRGYLDYYLDDYSGWLEERVKSDQYWGKISSCIRDSKTCRKLARNFNGVPETSDMFFQRKLAPIQSGCCKPPTDCGYIYQNETVWIQGAGLMGNNPDCIKWNNDQQQLCYDCDSCKAGVLGSLKKSWRKVSVINIVVMIILVIVYIIAYYAYRNNKRMDNDEPYGEARMTKSQPSAFHL 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01662 285 PRINTS Transmembrane four family signature 39 65 - -
Trre7g01662 285 PRINTS Transmembrane four family signature 6 29 - -
Trre7g01662 285 PRINTS Transmembrane four family signature 66 94 - -
Trre7g01662 285 Pfam Tetraspanin family 6 253 IPR018499 GO:0016020
Trre7g01662 285 PANTHER TETRASPANIN-8-RELATED 1 264 IPR044991 GO:0009734|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01662 Trre-Chr7 12726079 12730492 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01662 1 277 Miscellaneous Gene Families AT5G60220 72.202 4.43e-131 373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01662 - - gmx:100788977 476.863