Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01635 ATGATGTTGAAGAAACAATCTCATATCTTGTCCTTGACATTGGCAATAGTAGTTTCCCTTTTGTATTCTACCACTATAACTTTGTCCCAATTATCACCTGCTAATGCTCCGATAAAACCTACCCTACCTTCCCCGACAGTACCGGCCGCTGCCCCGAAACCATTGGTTCCCTCATTACCACAATCACCTTCACCCACCGATGCCACGCCTGACACTCCAAGCGTTGACATCGTTGGAATCCTGAGGACAGCCAAGTCATATAACGTCCTAATCCGACTCATGAAAACAACTCAATTGATCAGCCAACTCAATTCACAACTATTGACTATCAAATCAGGCGGATTAACGATTCTTGCACCAGATGATAGCGCTTTCTCACAACTCAAAGCAGGATTTCTCAACACTCTTTCCGATGGACAAAAACTCGAGCTGTTACAATTCCACGTCATCTCAGATTATGTATCTAGCTCAAATTTCGATACTTTAACAAACCCTGTGAGAACACTTGCCGGAGCTAAACCCGGAAAGGTGGAACTAAATGTGATTAGTTACGGAGGAAGTGTGAACATATCGACAGGGGAAGTGAACACTACAATTGACGGAATTATATATACCGATAAACATCTCGCTATTTATAAAGTTGGTAAAGTACTTCTTCCTACCGAATTTTTTTCTAAAGCTAAGGCACCAGGGAAGGCACCATCTTTGGCACCAGAACCTTCAGCATTGTCTCCAAAAGCCGATAAGGAGAAACCATTATCACCAGATTCCTCGGATTCATCATCTCAGGTTAAGCCTTCTTCGAATAATAGTTCTGGTACCGTGAAAATCATCGCAAATGGAAAGTGGATTTCCCTTGTTCTTGGTCTTGGAATTGTTATCTTAACTTCATTGATAGCATAA 903 0.4197 MMLKKQSHILSLTLAIVVSLLYSTTITLSQLSPANAPIKPTLPSPTVPAAAPKPLVPSLPQSPSPTDATPDTPSVDIVGILRTAKSYNVLIRLMKTTQLISQLNSQLLTIKSGGLTILAPDDSAFSQLKAGFLNTLSDGQKLELLQFHVISDYVSSSNFDTLTNPVRTLAGAKPGKVELNVISYGGSVNISTGEVNTTIDGIIYTDKHLAIYKVGKVLLPTEFFSKAKAPGKAPSLAPEPSALSPKADKEKPLSPDSSDSSSQVKPSSNNSSGTVKIIANGKWISLVLGLGIVILTSLIA 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01635 300 Gene3D FAS1 domain 59 221 IPR036378 -
Trre7g01635 300 FunFam Fasciclin-like arabinogalactan protein 11 58 220 - -
Trre7g01635 300 MobiDBLite consensus disorder prediction 256 271 - -
Trre7g01635 300 SMART fasc_3 116 221 IPR000782 -
Trre7g01635 300 MobiDBLite consensus disorder prediction 42 73 - -
Trre7g01635 300 MobiDBLite consensus disorder prediction 229 271 - -
Trre7g01635 300 ProSiteProfiles FAS1/BIgH3 domain profile. 74 203 IPR000782 -
Trre7g01635 300 MobiDBLite consensus disorder prediction 42 67 - -
Trre7g01635 300 Pfam Fasciclin domain 87 220 IPR000782 -
Trre7g01635 300 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 9 277 IPR045003 -
Trre7g01635 300 SUPERFAMILY FAS1 domain 65 221 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01635 Trre-Chr7 12503690 12504592 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01635 - - tpra:123919982 476.092