Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01634 ATGATTAGAAGTAAATCTCTCTTTTCCTTCTCAATTGCAATACTAGTTTCACTCTTGTATTCCACCACAACAACTTTATCCCAATTATCACCTGCTAATGCTCCAATACAACCTACACTACCTTCCCCAACCCAACCAGCTGCAGCCCCTAAACCTTTGGTACCTTCATTACCAGAGTCACCTAGTGACTCCACACCCGACACTACAGGCGCAGTTGACATCGTTGGAGTCCTCCGAAAGGCCAAGTCATTCAACGTCTTAATCCGACTCATGAAAACAACTCAATTGATCAACCAACTCAATTCACAACTATTGACTATAAAATCAGGTGGATTAACGCTTCTCGCGCCAGATGACAGCGCCTTCTCACAGCTCAAAGCAGGATTCCTTAACTCACTTTCCGATGGACAGAAACTCGAGTTATTACAATTCCACGTTATTTCGGATTATGTATCTAGCTCAAATTTTGATACTCTAACCAACCCTGTGAGAACACTTGCGGGAGCCAAACCCGGAAAGGTTGAGCTAAATGTGATAAGTTACGGTGGGAGCGTGAACATATCGACGGGGGAAGTGAACACTACAATCAATGGCATTATATATACTGATAAGCATCTTGCTATTTATAAAGTTGGCAAGGTGCTTCTTCCTACGGAATTCTTTTCCGTTGCTAAGGCTCCAGAAAAGGCTCCTTCTTTGGCACCAGAACCTTCAACTGGTATGGCAAAGGCGCCTAAAACCGATAAGGATACATCCACGGACTCGTCGCAGGTAATTAATCCAACTGAAGAGAAATCTGGTTCTGTGAAGATTGTGTATGGAAAGTTTTTGTCACTTGGACTTGTATTAGCTTTGGTGGTGATCATGCAAACTTGA 876 0.4304 MIRSKSLFSFSIAILVSLLYSTTTTLSQLSPANAPIQPTLPSPTQPAAAPKPLVPSLPESPSDSTPDTTGAVDIVGVLRKAKSFNVLIRLMKTTQLINQLNSQLLTIKSGGLTLLAPDDSAFSQLKAGFLNSLSDGQKLELLQFHVISDYVSSSNFDTLTNPVRTLAGAKPGKVELNVISYGGSVNISTGEVNTTINGIIYTDKHLAIYKVGKVLLPTEFFSVAKAPEKAPSLAPEPSTGMAKAPKTDKDTSTDSSQVINPTEEKSGSVKIVYGKFLSLGLVLALVVIMQT 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01634 291 MobiDBLite consensus disorder prediction 36 59 - -
Trre7g01634 291 MobiDBLite consensus disorder prediction 230 261 - -
Trre7g01634 291 MobiDBLite consensus disorder prediction 36 69 - -
Trre7g01634 291 FunFam Fasciclin-like arabinogalactan protein 11 56 217 - -
Trre7g01634 291 ProSiteProfiles FAS1/BIgH3 domain profile. 71 206 IPR000782 -
Trre7g01634 291 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 7 258 IPR045003 -
Trre7g01634 291 Pfam Fasciclin domain 83 217 IPR000782 -
Trre7g01634 291 SUPERFAMILY FAS1 domain 71 218 IPR036378 -
Trre7g01634 291 Gene3D FAS1 domain 57 218 IPR036378 -
Trre7g01634 291 SMART fasc_3 113 218 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01634 Trre-Chr7 12495117 12495992 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01634 - - gmx:100794280 428.713