Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01629 ATGGTGATGATGAAACATCAAATTCTTTCTCTCCCACTTCTTCTAATGATTCTTTGCTCTTCCACTACCATTTTAGCCGCGAAATCACCTGCTCCGGCACCAGATGATTCAGGTCCAACAGACATAATCAGAATCCTCAAAAAGGCCGGAGGGTTCACCACGCTAATCCGTCTTCTCCAGACAACACAAGTGTCCACCCAAATCAACTCTCAGTTATTAAACTCGAATGGTGGTTTAACCTTGTTTGCGGCAAATGACAATGCCTTTTCGAGCCTCAAACCTGGTTTTCTCAATTCGCTTAGCGATGAACAAAAGAATAAGCTCATTCAATTCCACTTGTTACCTACATTTGTATCCACATCGAATTTCGATACTTTGAGTAACCCTGTGAGAACACAGGCTGGTGATGACCCTTATAGATTAGGACTTAATATAACAAGTTCAGGAAACCAAGTGAACTTGACAACAGGTATTGTCAATGTCACGGTTGGTGGCACTGTTTACACCGATCACCAACTCGCGGTTTACCAAGTCGATAAGGTACTTCTTCCTCGCGATTTCTTCGTTGCTAAACCTCCTGCACCGGCTCCAGCACCTGAAAAGGCTAAGTCATCGTCGTCTAAGAAGAAATCCGCGGATAACGATGTAGTTGCAGGAGACGACGATTCTGCTGCTGCTGCTAGTGTGAAACAGCGGTGTCTAATGTCTGTTCCGGTTGCAGTTGCTACAATTATAGTAGCATTATTTTCATGGTGA 756 0.4392 MVMMKHQILSLPLLLMILCSSTTILAAKSPAPAPDDSGPTDIIRILKKAGGFTTLIRLLQTTQVSTQINSQLLNSNGGLTLFAANDNAFSSLKPGFLNSLSDEQKNKLIQFHLLPTFVSTSNFDTLSNPVRTQAGDDPYRLGLNITSSGNQVNLTTGIVNVTVGGTVYTDHQLAVYQVDKVLLPRDFFVAKPPAPAPAPEKAKSSSSKKKSADNDVVAGDDDSAAAASVKQRCLMSVPVAVATIIVALFSW 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01629 251 Gene3D FAS1 domain 17 185 IPR036378 -
Trre7g01629 251 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 9 229 IPR045003 -
Trre7g01629 251 MobiDBLite consensus disorder prediction 193 217 - -
Trre7g01629 251 Pfam Fasciclin domain 51 184 IPR000782 -
Trre7g01629 251 SUPERFAMILY FAS1 domain 34 185 IPR036378 -
Trre7g01629 251 MobiDBLite consensus disorder prediction 203 217 - -
Trre7g01629 251 ProSiteProfiles FAS1/BIgH3 domain profile. 39 182 IPR000782 -
Trre7g01629 251 SMART fasc_3 80 185 IPR000782 -
Trre7g01629 251 FunFam Fasciclin-like arabinogalactan protein 11 21 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01629 Trre-Chr7 12480016 12480771 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01629 - - psat:127107944 358.221