Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01600 ATGAACACGAGATCCCGAAATTCAATACAGGGATTTCGTGTTTGTATGGATCATATTATCAAGTTCTTCTTGTTCCTCATTCTCTTTGGATTAGTGAATGCATGTTTTGCTGAAGATAATTATGGACATTGTGAAAGAGTTGTTAAGAGTTGGGCGAGTTCTTCTCTTGATGGAGAAATTAGACAAAAAGATAAGCATACTCTCAAGGATTTGTTGTTTTTCTTGCATGTTCCTAGAACGGGAGGACGTACTTATTTTCATTGCTTTTTGAGGAAATTGTATCCGGGCTATTTGGAATGTCCTCGATCTTATGATAAGTTGCGCTTTAATCCAAGCAAGGAAAAATGTAGACTGTTGGTTACACATGATGACTATAGCATGATATCTAAACTTCCAAAGGATAGAACTTCTGTGGTTACCATACTTAGGGATCCGGTTGACCGTGTCTTTAGTACTTATGAATTTTCAATGGAGGTTGCGGCTAGATTTTTGGTGCATCCAAACTTGACATCTGCAACACAGATGGCTTTTCGCTTGCGTTCTAAAGCTAAAGGAATAAGCACATTGGATATCTGGCCGTGGAAGTATCTGGTTCCATGGATGAGAGAAGACCTATTTGCTAGGAGAGAAGCTAGGTATAGTAAGGGACTGAATACTGTTGAGGGTAGTGATCCTTATGATATGGAATATTTTGCAATGCCTTTACAAGAATACATCAATCATCCTGCGGCTTGGGATATTGTACATAATGGAGCCACATTTCAGATTGCAGGTTTGACAAACAATTCTTATATAGCAGAAGCACATGAAGTGCGTCATTGTGTACAAAAATATAAGGTTCTTGGTAAATATGTGATACAAGTTGCAAAGAAGAGACTGGACGATATGTTATATGTTGGTCTTACCGAGGAGCACAGAGAATCTGCAACAATGTTTGCAAATGTTGTTGGTTCTCAGGTTATATCACAGCTTATTTCACCAAACACCAGCCTGGATATTATTGAAAATACAGAACAGAGTTCATTTTCAGATGTCGATCCTGGTAGCGGTGAACATCAGAATAGCACCTCAGACAGGGGAGCAATTGAGGCTACTTCAAGTAAAAATGGAGAAGCGGCAAAATCAACCATGACTGTCGGGAAACTCATGGATTCTTATGAAGTCTGTATTTCTAAGTTACGCAAGACCCAATCAGGCCGACGCTCCGCCTCTTTGAAGAGGATTCCGGTGAACTTTACAAAGGAGGCACGGCTTCGAGTTCCTGAAGAGGTTCTCCAGCACTTGCGATCTCTCAATCATCTTGACTTGGAGCTGTATGATTATGCAAGAGCCATTTTCAATAATCAACATAAAACCTCATTGCTGATTACTGAGGAGAAATTGGACAACATATCAAGTAGTGCATATAGCATCATCCTCTGGAAGGCTCTTACATTAACAATAACTTTCTTCTTCATCCTATTCTTATTCTTACTAATTGTAAATGTGAGAAGAAGAACGTTGAAGGTTAAGAAGTAA 1518 0.392 MNTRSRNSIQGFRVCMDHIIKFFLFLILFGLVNACFAEDNYGHCERVVKSWASSSLDGEIRQKDKHTLKDLLFFLHVPRTGGRTYFHCFLRKLYPGYLECPRSYDKLRFNPSKEKCRLLVTHDDYSMISKLPKDRTSVVTILRDPVDRVFSTYEFSMEVAARFLVHPNLTSATQMAFRLRSKAKGISTLDIWPWKYLVPWMREDLFARREARYSKGLNTVEGSDPYDMEYFAMPLQEYINHPAAWDIVHNGATFQIAGLTNNSYIAEAHEVRHCVQKYKVLGKYVIQVAKKRLDDMLYVGLTEEHRESATMFANVVGSQVISQLISPNTSLDIIENTEQSSFSDVDPGSGEHQNSTSDRGAIEATSSKNGEAAKSTMTVGKLMDSYEVCISKLRKTQSGRRSASLKRIPVNFTKEARLRVPEEVLQHLRSLNHLDLELYDYARAIFNNQHKTSLLITEEKLDNISSSAYSIILWKALTLTITFFFILFLFLLIVNVRRRTLKVKK 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01600 505 Pfam Sulfotransferase domain 98 160 IPR000863 GO:0008146
Trre7g01600 505 MobiDBLite consensus disorder prediction 339 374 - -
Trre7g01600 505 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 67 167 IPR027417 -
Trre7g01600 505 PANTHER HEPARAN SULFATE 6-O-SULFOTRANSFERASE 3 19 452 IPR010635 GO:0008146|GO:0016020
Trre7g01600 505 Gene3D - 67 344 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01600 Trre-Chr7 12169335 12180639 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01600 K22218 - gmx:100810026 756.133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g01600 7 12169335 12180639 Trre7g01600 7 12169335 12180639 ECH