Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01591 ATGGCCGCTAAAAGTGGAACGACTCCGGCGACATACTCGCCGTCTCCGACAACCGGTAAAAAGAAAGCAGCAATTTTCAAGGAAGATTGGATCCGAACTGATGGCCGTGGCTTCCACCAGTGTAGACCCGCCTTTTTCAGGACTGGTGCTGTGAATGCTGCATCAGGATCAGCTTATGCTGAGTTTGGAAATACCAAGGTCATTGTATCGGTGTTTGGGCCAAGAGAGAGCAAGAAGGCAATGATGTATAGTGATACAGGGCGTCTGAATTGCAATGTCAGTTATACAACATTTTCAACTCCGATTCGTGGACAGGGTTCAGACCACAAAGAGCACAGTTCGATGCTTCAGAAAGCTTTGGAGGGTGCAATAATATTGGAAAGTTTCCCTAAGACCACTGTGGATGTGTTTGCATTGGTGCTGGAATCTAGTGGCAGTGATCTCCCAGTTGTCATATCAGTTGCTAGTCTTGCCTTGGCAGATGCTGGAATACTGATGTATGACCTTGTTGCCTCGGTTTCTGTGTCATGTCTCGGTAAGAACCTCGTCATTGATCCAATTTCGGAGGAGGAAAACTGCCAAGATGGAAGCTTAATGATCACATGCATGCCTTCTCGCTATGAAATCACCCAATTGACTGTTACTGGTGAATGGTCCACCTCGAAGATTAATGAGGGGATGCAGCTGTGCTTGGATGCTTGTGCAAAGCTTGCAAAGATTATGAGGTCGTGTTTGAAAGAATCCGCCTCTGATGCACAAGGATTGGATAATGAGAATTCTTAG 783 0.4623 MAAKSGTTPATYSPSPTTGKKKAAIFKEDWIRTDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDTGRLNCNVSYTTFSTPIRGQGSDHKEHSSMLQKALEGAIILESFPKTTVDVFALVLESSGSDLPVVISVASLALADAGILMYDLVASVSVSCLGKNLVIDPISEEENCQDGSLMITCMPSRYEITQLTVTGEWSTSKINEGMQLCLDACAKLAKIMRSCLKESASDAQGLDNENS 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01591 260 SUPERFAMILY Ribonuclease PH domain 2-like 166 250 IPR036345 -
Trre7g01591 260 Pfam 3' exoribonuclease family, domain 1 40 164 IPR001247 -
Trre7g01591 260 CDD RNase_PH_MTR3 41 247 - -
Trre7g01591 260 Pfam 3' exoribonuclease family, domain 2 168 228 IPR015847 -
Trre7g01591 260 Gene3D - 19 254 IPR027408 -
Trre7g01591 260 SUPERFAMILY Ribosomal protein S5 domain 2-like 28 195 IPR020568 -
Trre7g01591 260 PANTHER EXOSOME COMPLEX COMPONENT 32 245 - -
Trre7g01591 260 FunFam Exosome complex component RRP41-like 12 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01591 Trre-Chr7 12080087 12083898 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01591 K12587 - gmx:100819105 446.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g01591 7 12080087 12083898 Trre7g01591 7 12080087 12083898 ECH