Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01580 ATGTCCCACTCCTACCAGCACTCACAACCACAACAAAAACTGTTATTATCTCAATACAATCTCAACAAACTTGATGAACAAATTATCAATATTAATATTCCTGAAAAGTCCCTCTCAACTTCTCAAACACTTCACAAACTCACCTCAACTGCAACAACAACATCAACACGCTCTAGCTTCTCTTTCTTTGACACCAAGCATTATGAAGAACAAGAATTTCATAACCCTGCATTCCCCTGTTGTTTTAATATTCTTTCTAACTCTAAACGCTTCGTGTTCGGCTCGGTTTCTTCCATGGATCATACTCAACTAGATCGTTTCTCATCACTTAATTCTCCTTCTCAAAATAATTTTACAAAAAAGAAAATTGACGGACTGCAAAAGAAAGAGGAACTTGAAAGAGAGGTTACTATGCTTCAAAGGTTGTTAGACCAAGAAGAAAAGGTTCATCAAATATTAGATATGGTGAATAGTAGACCAAATGGTTCAACTATATCTATTCCCAATTTTCTTCCTTCTAAGATGAGAGAATTGTTAGGAGAGCTAGCCATGGTTGAGGGTGAGATAGCAAGACTTGAATCTCAAATTAGCACACTTCAAGCTGGTTTGAAACATGAACAAGAAATCACAAAAGGATCCAAATCAAAAACATCGAATCAAGGAAATTTGATCAACAATTCTAACTACAATCATTTAAAAACTTCAACAATTACAAATCCTGGTTTGGTTCAAAGAAGTAGTAGTAATGTTCATGAAAGGATGGCATTTGAAACCAAGGCATTGCATTTCATAAGTAAAGCCATCAAGGGTGATTATAATCTTAATGACTTTAGTATTAATGAGAAAACAGGAATTCCTAAAAATTCTGTTGAGCAGAAAGAAAATAATTTTCAAGAAGATGTGAAATTGCATGAAAGAGTTACAAGGAAAAATGGAGCAGTGAAGCCTCCCTCGCCTATGCGAGACCCGCGCCATCCATCACCTAAGCTGCGCGAACGTAATCTAGACATGTACTTAGATCTCCCAACAAGATCACTACTTGATCCACTTCTATCAGAAGAGAATGACCTAAAGTGGCAACCAAATAAGCTATCAGAAAGCATCATGAAGTGTTTGAATTTCATTTATGTAAGACTACTCAGAACATCAAGAGCAACAGAATTGGAGAAATCGGGACCAGTTTCAAGGTCTTTGCATTCTTCTTTAAGCTCAAGAAGTTTCAGGGTCGATATAGGATCTACCCCGAAACCAAGTCTTATGTTGCAAAAAGAATCTCGTCAACAAGATCCATATGGTATTTTTAATACAGAAGACTCTATTCCAAGGGATATTGGTCCTTATAAGAATTTGGTCATATTCACATCAAGTTCTATGGATCCAAAATTCATCTCAAGTCCTTCCTCTATTCCATTACTAAGAAAGTTAAGGATCTTGATGAGCAATCTTCAAACAGTTGATTTGAAAGGCCTAACAAATCAACAGAAATTAGCATTTTGGATCAACTTGTACAATTCTTGTATTATGCATGGATTTATTCAATATGGAGTACCATCGACCCCAGAAAAATTAGTTGCATTGATGAACAAGGCAACCCTAAACATAGGTGGCAACATAATAAATGCTCAAGCAATAGAGCATTTTATTTTAAGGAAAAGAGACACTTCTAACATGAAAGAGGCACAAAGGAAGGGGGAGTGGGAAGAGAAAGAATCAGTTGTCCGAGAGCTTTATGGGCTTGAAATTGTGGATCCAAATGTCACATTTGCTCTTTGTAATGGAACTCGTTCTTCTCCTGCAGTAAGGATATACACAGGTGATGGTGTGACATCTGAATTAGAGAAATCAAAGCTAGATTACCTTCAAGCTTCAATTCTAGCTACTAGCAACAAAAGGATAGGGTTTCCAGAACTCCTCCTTAGAAACATGCTTGATTTTGCTATGGATATTGACTCACTAGTGGATTGGGTGTGCAACCAATTACCTACTTCAGGAACTCTAAGGAAATCAATGGTTGAATGCTTTAGAGGTCATAGTGGTAATGTCAAGGCTTCAACTATTGTTGAAAAGATACCATATGACTATGAATTCCAATATTTGTTGACCATATAA 2109 0.3646 MSHSYQHSQPQQKLLLSQYNLNKLDEQIININIPEKSLSTSQTLHKLTSTATTTSTRSSFSFFDTKHYEEQEFHNPAFPCCFNILSNSKRFVFGSVSSMDHTQLDRFSSLNSPSQNNFTKKKIDGLQKKEELEREVTMLQRLLDQEEKVHQILDMVNSRPNGSTISIPNFLPSKMRELLGELAMVEGEIARLESQISTLQAGLKHEQEITKGSKSKTSNQGNLINNSNYNHLKTSTITNPGLVQRSSSNVHERMAFETKALHFISKAIKGDYNLNDFSINEKTGIPKNSVEQKENNFQEDVKLHERVTRKNGAVKPPSPMRDPRHPSPKLRERNLDMYLDLPTRSLLDPLLSEENDLKWQPNKLSESIMKCLNFIYVRLLRTSRATELEKSGPVSRSLHSSLSSRSFRVDIGSTPKPSLMLQKESRQQDPYGIFNTEDSIPRDIGPYKNLVIFTSSSMDPKFISSPSSIPLLRKLRILMSNLQTVDLKGLTNQQKLAFWINLYNSCIMHGFIQYGVPSTPEKLVALMNKATLNIGGNIINAQAIEHFILRKRDTSNMKEAQRKGEWEEKESVVRELYGLEIVDPNVTFALCNGTRSSPAVRIYTGDGVTSELEKSKLDYLQASILATSNKRIGFPELLLRNMLDFAMDIDSLVDWVCNQLPTSGTLRKSMVECFRGHSGNVKASTIVEKIPYDYEFQYLLTI 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01580 702 MobiDBLite consensus disorder prediction 311 330 - -
Trre7g01580 702 Coils Coil 175 202 - -
Trre7g01580 702 Pfam Protein of unknown function, DUF547 488 620 IPR006869 -
Trre7g01580 702 Pfam Leucine-zipper of ternary complex factor MIP1 127 206 IPR025757 -
Trre7g01580 702 Coils Coil 129 149 - -
Trre7g01580 702 MobiDBLite consensus disorder prediction 206 225 - -
Trre7g01580 702 PANTHER EXPRESSED PROTEIN 118 701 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01580 Trre-Chr7 11949245 11955054 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01580 - - gmx:100809848 1003.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g01580 7 11949245 11955054 Trre7g01580 7 11949245 11955054 ECH