Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01573 ATGAATACTAGTAATAATAATAATAATCAGGTTGGTGGTGGAAATGGAGAAGTGAATAATAAGATACTTTATATAGTTGTTATTGATGATGTTGAGAAGAAACTCAAAGATGATAATAAAGGAAAAGAATCGTTTCGGTATACGCGTTCTGTTTTGCAGAGTACTCTGCAACTTATGGGATGCAAAGCTAGACACGCATTCAAGATCAGCAAAAGAGTTTTCGAAAATACAAGGAGCGAGTGTTCTACTGATAATTTGAAGCTTGAGGCAGCAGTTTCATCAGGTCCCAACACACTCAAGGGAAATTTTGGGAAAAAAGCAGACTTAGGAAACCAACCACCACTTTTGGGGAAACATAATAGAACTAAGAGTATACCATTTGAGTTGTACAAAATGCGCACATCTGTATTTGTTCGGAGAGAAACATTTCTAGATATTGTGTGTGATGGTCTGGCCGAGTACAAGTATGTTGGTCCTAACCAAAGAGCAGACTTGATTCTAGCCTGCAGACTCCGTGAACGGAAGGAATCTGTGACTGTGCTGCTGTGTGGCACAAGTGGATGTGGTAAATCCACATTGTCTGCATTACTGGGTAGCAGATTGGGAATCACGACAGTGGTATCAACCGATTCTATCAGGCACATGATGAGAAGTTTTGCTAATGAGAAAGAAAACCCGTTGTTGTGGGCTTCTACCTACCACGCAGGCGAGTGTTTGGATCCTGTTGCTGTTGCAGAAGCAAAAGCCAAAAAGAAAGCAAAAAAGATGGCTGGTGTGTCACAATCACTTGCCAAGGATGAAGTAACCGATGGCCAAAATTCTATCAAATCTGATACACGGACATCAGAGATGGGATCTAGTGCTGCTGAGCGTCCAAGTCCAAAACAAATGGCTATTGAAGGATATAAGGCACAGAGTGAGATGGTGATCGACAGTCTTGATAGGCTAATCACTGCCTGGGAAGAACGAAAAGAGTCTGTTGTTGTCGAGGGTGTTCACCTGAGCCTCAACTTCGTTATGGGGCTTATGAAGAAACATCCGTCGATTATACCATTCATGATATACATTACAAATGAGGAGAAGCATTTGGAAAGATTTGCTGTGCGTGCGAAATATATGACACTAGATCCAGCTAAAAACAAGTATGTGAAGTATATCCGAAACATCAGAACAATCCAGGATTATCTCTGTAAGGGTGCTGAAAAGCATTTAGTTCCCAAAATAAACAATACAAATGTTGACAAGAGTGTAGCAGCCATCCACGCAACTGTCTTCAGTTGCCTTAGAAGGCGTGAAATTGGGGAACAACTATATGATCCTGTTAGAAATACTGTCACGGTTATTTATGAGGAATACAGAAATCAATGCACAGCGAATTCTTTGACCTCAAAAGGAATGTTTCAATTGATTCAGAGAAAAGGTTCTTCAAGGAGTCTGATGGCTCTAGTTAATGACGATGGTTCTGTGGCGAAGGCTTGGCCGGTCAATTTAGTTGATAGTAATGGGAAGCCCATATGGGGTGAGGGACCAGAGAATGGAATAGGACATCCAATGTATGGTCCCTTACGGATTGGTAAGGCAGAGCCTGTAAATCTTCAGTTTGGTTTTTATGGAATCAGTGCCTGGCCTACCGATGGTGGCACTAGTGGCACTAGTCGTGCGGGAAGTGTTGATGAGTCCAGAGCTGATGGGACCGATACCGGTAGTAGATATGTATCCTCTTGCTGTAGCTCGCCTAGGATGTCAGATTGCCCCTCTAAGGAGCTTAAGGAAGACTTCTCGGTGCATGGTAGTGATGAAGAGATTGATGATCAACTAGATGTGGGCAGCGATGAGGATTTTAGTGACGACGGTGACAAAAGTGTCCATGATGAGGTTGGATCTGTTGATGAGGAATCAACAAAGTCAGATGAAGAGTACGACGATCTTGCAATGCAAGATGGAATGGAAAACGGTTATTGGTCAGATGATGATGATTACGAGCTTAGAAGTAAACTTGTTGAGGAGCTTGGAGCTAAACTCCATGGGCATAAGTACCATCAAAACCTTGATCAATTCCTTAGAACTAGAAGTGAACCAGTGCCTATAGAAATGGTATCTCAAGAACCATTTTGCTCTTATTCTTCTTTACTAGTTGAAAAGAATGATAGGAAAGTAACATCAAATGGTAAAGCCAAATTCAGAAAACGTTCTCTTAGTATTCCTGCATTAGGAAAGCATAGTTCTGCTATCAATGATCCAATCCTTTCTGGTACTCCTCAAAGGTAG 2268 0.4171 MNTSNNNNNQVGGGNGEVNNKILYIVVIDDVEKKLKDDNKGKESFRYTRSVLQSTLQLMGCKARHAFKISKRVFENTRSECSTDNLKLEAAVSSGPNTLKGNFGKKADLGNQPPLLGKHNRTKSIPFELYKMRTSVFVRRETFLDIVCDGLAEYKYVGPNQRADLILACRLRERKESVTVLLCGTSGCGKSTLSALLGSRLGITTVVSTDSIRHMMRSFANEKENPLLWASTYHAGECLDPVAVAEAKAKKKAKKMAGVSQSLAKDEVTDGQNSIKSDTRTSEMGSSAAERPSPKQMAIEGYKAQSEMVIDSLDRLITAWEERKESVVVEGVHLSLNFVMGLMKKHPSIIPFMIYITNEEKHLERFAVRAKYMTLDPAKNKYVKYIRNIRTIQDYLCKGAEKHLVPKINNTNVDKSVAAIHATVFSCLRRREIGEQLYDPVRNTVTVIYEEYRNQCTANSLTSKGMFQLIQRKGSSRSLMALVNDDGSVAKAWPVNLVDSNGKPIWGEGPENGIGHPMYGPLRIGKAEPVNLQFGFYGISAWPTDGGTSGTSRAGSVDESRADGTDTGSRYVSSCCSSPRMSDCPSKELKEDFSVHGSDEEIDDQLDVGSDEDFSDDGDKSVHDEVGSVDEESTKSDEEYDDLAMQDGMENGYWSDDDDYELRSKLVEELGAKLHGHKYHQNLDQFLRTRSEPVPIEMVSQEPFCSYSSLLVEKNDRKVTSNGKAKFRKRSLSIPALGKHSSAINDPILSGTPQR 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01573 755 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 430 IPR027417 -
Trre7g01573 755 MobiDBLite consensus disorder prediction 265 289 - -
Trre7g01573 755 MobiDBLite consensus disorder prediction 545 637 - -
Trre7g01573 755 MobiDBLite consensus disorder prediction 584 603 - -
Trre7g01573 755 MobiDBLite consensus disorder prediction 260 296 - -
Trre7g01573 755 Gene3D - 179 424 IPR027417 -
Trre7g01573 755 MobiDBLite consensus disorder prediction 566 581 - -
Trre7g01573 755 PANTHER P-LOOP NTPASE DOMAIN-CONTAINING PROTEIN LPA1 HOMOLOG 1 20 654 - -
Trre7g01573 755 MobiDBLite consensus disorder prediction 615 630 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01573 Trre-Chr7 11912616 11918144 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01573 - - tpra:123919917 1370.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g01573 7 11912616 11918144 Trre7g01573 7 11912616 11918144 ECH