Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01559 ATGACAGCAACCTCTACATTACACTTCCTCTCTCGTCTCCGATTGATCACAAAAACCAAACCTCTCTCTATTCCATCACCTCTTTCAATCCCATTCCATTTCTCCCTCACCTCCAAATCAAAGAAACCGACACGAATTCGATTTTTCTCAATGGCTTCTGCGGAACACAAGGAGTCACCGGTTAATAACCCTGGTCTTCATACAACTGTAGATGAAGCTACTAAGGGTTACTTTATGCAACAAACTATGTTCAGAATCAAAGACCCTAAAGTTAGCCTTGATTTTTATTCCCGCGTTTTGGGCATGTCTTTGCTTAAGAGGTTGGATTTTCCTGAGTTGAAGTTCAGCTTGTACTTTATGGGTTATGAGGATACATCTGAAGCTCCAAGTAACCCTGTTGATAGAACAGTTTGGACCTTTGCTCAAAAGGCTACAATCGAATGGACACATAATTGGGGCACTGAAAGTGATCCAGAGTTCAAAGGGTACCACAATGGCAATTCTGATCCTCGTGGTTTTGGACACATTGGCATTACTGTTGACGATACCTACAAAGCATGTGAAAGATTTCAGAATCTGGGAGTTGAGTTTGTCAAGAAACCAGATGATGGGAAAATGAAAGGGATAGCCTTTATTAAGGATCCCGATGGGTACTGGATTGAAATCTTTGACAGGAAAACAATAGGAAACGTAACAGGAGGTGCTGCTTAA 711 0.4149 MTATSTLHFLSRLRLITKTKPLSIPSPLSIPFHFSLTSKSKKPTRIRFFSMASAEHKESPVNNPGLHTTVDEATKGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPELKFSLYFMGYEDTSEAPSNPVDRTVWTFAQKATIEWTHNWGTESDPEFKGYHNGNSDPRGFGHIGITVDDTYKACERFQNLGVEFVKKPDDGKMKGIAFIKDPDGYWIEIFDRKTIGNVTGGAA 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01559 236 PANTHER LACTOYLGLUTATHIONE LYASE GLYOXALASE I 26 231 - -
Trre7g01559 236 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 68 225 IPR029068 -
Trre7g01559 236 CDD GlxI_Zn 79 223 - -
Trre7g01559 236 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 81 222 IPR004360 -
Trre7g01559 236 NCBIfam lactoylglutathione lyase 79 227 IPR004361 GO:0004462|GO:0046872
Trre7g01559 236 Gene3D - 52 232 IPR029068 -
Trre7g01559 236 ProSitePatterns Glyoxalase I signature 1. 81 102 IPR018146 GO:0004462|GO:0046872
Trre7g01559 236 ProSitePatterns Glyoxalase I signature 2. 166 182 IPR018146 GO:0004462|GO:0046872
Trre7g01559 236 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 78 225 IPR037523 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01559 Trre-Chr7 11764894 11769545 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01559 27 236 Calmodulin-binding Proteins AT1G08110 73.953 3.51e-109 312
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01559 K01759 - gmx:100779383 397.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g01559 7 11764894 11769545 Trre7g01559 7 11764894 11769545 ECH