Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01542 ATGCAAACAGAGAATCCAAAAATGGCGAAGAAATCAATCGGAAACATAATGCGAAAAAGGCTTTCGGATATCACAAATTCATCTCAATCTCAACATGAAAATAACAACCAACCAATCTCACTCGATAACAATTCCATTCAACAACTCCTAAAGGAAAGAGCCAATTTAATCAACCTCCTTGCAGACAGAAATAAAATGTTAGAAAGAAGTGGAGCTGAATTGCAGAGATTGCGAGCTGATATGAAGAAGTTGCAAATGCAAAACTGGAATCTTGCTCAGTCCAATAGTCTCATGTTAGCGGAGCTTAACTTGGGGAGGGATAAGATAAAAACACTGCAGCATGAAATTTTGTGGAGGTCTGCTTTGATTAATGGAAAGACCTTCAACATGCAGGAAAAAGTGGAGATTGACTCTGAAAAGAATGCATCATTATCACAGTTAAAGGAAGAAGATGAAAAAGAAGAGCAACCATCCCCAATAACTAGCAATGATGAAAAACAATGTTGTTTGAACAGGAGACGCATAAGGAGTAGATCTACTGGTTCTTCTACTGCTTCCACATCCACAAAGAATACAGGCAAAGAAAAAGTTAAAGACAGAAGGAGAAGAAGTTTGAGGAGACATTCCGCTACGTCAAAGGTCCATCAACATGAACCTCTAGAAAATTTGTTTGAGATAGAGGACGCTCAATACGCTATCACTCAATCTGATAAACCGAGTTCTTCATCTGTGAAAACGGAAAGAAGAGAAAACACTTGTTTAAGAAATGAAGCACCAAGGCATTCTTTTGGAAGACCCTTGAGAAGGGCAGCTGAGAAGGTTCCATCTTACAAGGAAATCCCTTTAAATGTCAAGATGAGAAGGCTAGCATAA 873 0.386 MQTENPKMAKKSIGNIMRKRLSDITNSSQSQHENNNQPISLDNNSIQQLLKERANLINLLADRNKMLERSGAELQRLRADMKKLQMQNWNLAQSNSLMLAELNLGRDKIKTLQHEILWRSALINGKTFNMQEKVEIDSEKNASLSQLKEEDEKEEQPSPITSNDEKQCCLNRRRIRSRSTGSSTASTSTKNTGKEKVKDRRRRSLRRHSATSKVHQHEPLENLFEIEDAQYAITQSDKPSSSSVKTERRENTCLRNEAPRHSFGRPLRRAAEKVPSYKEIPLNVKMRRLA 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01542 290 MobiDBLite consensus disorder prediction 234 260 - -
Trre7g01542 290 MobiDBLite consensus disorder prediction 196 210 - -
Trre7g01542 290 MobiDBLite consensus disorder prediction 139 221 - -
Trre7g01542 290 MobiDBLite consensus disorder prediction 242 260 - -
Trre7g01542 290 MobiDBLite consensus disorder prediction 174 191 - -
Trre7g01542 290 PANTHER SHUGOSHIN 2 218 288 IPR044693 GO:0000775|GO:0034090|GO:0045144
Trre7g01542 290 Pfam Shugoshin C terminus 264 288 IPR011515 GO:0000775|GO:0005634|GO:0045132
Trre7g01542 290 Coils Coil 67 94 - -
Trre7g01542 290 MobiDBLite consensus disorder prediction 139 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01542 Trre-Chr7 11621676 11624592 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01542 - - mtr:11407170 418.698