Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01528 ATGGCACTCTCAGCTTTATCAACAACAGCAACACTTTCATCATCATCATCAAGAAACAAACCTCCAAATTCCATTCTCTTTTCATCATTCACAAAAAAGTCACAATTTTTGACAAAACAAACAAGACCCGGAAACAGAAAAAACTTTTCACTAACAGTTAGAAGCGTTGCAGCACCACCCACAAAAACTGAACCAAATCAATCCCCAGAAGCTGAAAGGAACGAAATTGATGAAGAATTTGATGATGAGAGTTCTTCCTCGAAATTTTCATGGAGAGATCATTGGTACCCAGTTTCGTTAATCGAAGATCTGGATCCTAGTTTGCCTACACCGTTTCAGCTTCTGGGTCGTGAAATTGTGCTTTGGTTTGATAATTCCAATTCTCAATGGGTTGCTTTTGATGATAAATGTCCTCACCGTCTTGCCCCTTTATCTGAAGGGAGGATAGATGAGGGTGGAAACTTGCAGTGTTCTTATCATGGTTGGTCTTTTGATGGGCGTGGAGGTTGTGTTGTAATTCCACAGGCTTCACCGGAAGGTCCCGAAGCGCGTGCTGTTGGGTCTCCTAGAGCTTGTGCTACTAGGTTTCCTACCTTGGTGTCTCAAGGGTTGCTCTTTGTTTGGCCTGATGAGAATGGTTGGGAGAAAGCAAATGCATCCAAACCTCCAATGTTGCCTGATGATTTTGTAAAACCAGAGTTTGCAACGGTGAACATTCAGCGCGATCTGTTCTACGGCTACGATACTCTCATGGAGAATGTCTCTGATCCTTCTCACATTGATTTTGCTCATCACAAGGTTACAGGAAGGAGAGATAGAGCGAAGCCTCTTCCATTCAAGATGGATGCACGTGGTCCGTGGGGATTTTCAGGAGCTAATGAAGGGAATCCACGGATCAGTTCCAAATTTATTGCACCATGTTATTACATCAACAAGGTTGAGATTGATACCAAGCTCCCAATAGTTGGTGACCAGAAATGGGTAATATGGATATGTTCATTCAATGTCCCCATGGCACCCGGTAAGACTCGCTCCATTGTTTGCAGTGCTCGAAATTTCTTCCAGTTCACAGTTCCAGGACCTGAATGGTGGAAAGTGGTTCCTAGATGGTATGAACATTGGACTTCAAACAAGGTATATGATGGAGACATGATTGTCCTTCAAGGTCAAGAGAAAATATTTCTCGCAGAAACCGAACAAGGTGGCGACATTAACAAACAGTACACAAGCCTCACCTTCACGCCAACACAAGCTGATCGTTTTGTGTTGGCGTTTAGAAATTGGCTGAGACGACACGGAAACGGAGAACCTGAATGGTTCAGCAAGAGTCGCCAGCCATTGCCTTCAACCGTACTATCAAAACGCGAGATGTTGGATAGATTTGAACAGCACACACAAAAGTGTTCATCTTGTAAAGGAGCATATGAGGGATTCAAAACATGGCAGAAAATCCTGATTGGTGCAACAGTTGTGTTTTGCGCAACTTCTGGGATTCCATCAGATATTCAGCTGCGTGTAATTTTGGCTGGACTCGCGGTTGTCAGCGCAGCCCTAGCTTTTGCCGTGAACCGACTAGAAAAGAATTTTGTATTCGTCGATTATGTGCACGCTGAAATCGATTGA 1623 0.4368 MALSALSTTATLSSSSSRNKPPNSILFSSFTKKSQFLTKQTRPGNRKNFSLTVRSVAAPPTKTEPNQSPEAERNEIDEEFDDESSSSKFSWRDHWYPVSLIEDLDPSLPTPFQLLGREIVLWFDNSNSQWVAFDDKCPHRLAPLSEGRIDEGGNLQCSYHGWSFDGRGGCVVIPQASPEGPEARAVGSPRACATRFPTLVSQGLLFVWPDENGWEKANASKPPMLPDDFVKPEFATVNIQRDLFYGYDTLMENVSDPSHIDFAHHKVTGRRDRAKPLPFKMDARGPWGFSGANEGNPRISSKFIAPCYYINKVEIDTKLPIVGDQKWVIWICSFNVPMAPGKTRSIVCSARNFFQFTVPGPEWWKVVPRWYEHWTSNKVYDGDMIVLQGQEKIFLAETEQGGDINKQYTSLTFTPTQADRFVLAFRNWLRRHGNGEPEWFSKSRQPLPSTVLSKREMLDRFEQHTQKCSSCKGAYEGFKTWQKILIGATVVFCATSGIPSDIQLRVILAGLAVVSAALAFAVNRLEKNFVFVDYVHAEID 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01528 540 MobiDBLite consensus disorder prediction 1 85 - -
Trre7g01528 540 Pfam Pheophorbide a oxygenase 303 398 IPR013626 GO:0010277
Trre7g01528 540 SUPERFAMILY ISP domain 88 213 IPR036922 GO:0051537
Trre7g01528 540 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 95 207 IPR017941 GO:0051537
Trre7g01528 540 Gene3D - 90 232 IPR036922 GO:0051537
Trre7g01528 540 Pfam Rieske [2Fe-2S] domain 94 178 IPR017941 GO:0051537
Trre7g01528 540 PANTHER IRON-SULFUR DOMAIN CONTAINING PROTEIN 13 486 - -
Trre7g01528 540 SUPERFAMILY Bet v1-like 202 437 - -
Trre7g01528 540 CDD Rieske_RO_Alpha_PaO 78 218 - -
Trre7g01528 540 MobiDBLite consensus disorder prediction 1 67 - -
Trre7g01528 540 Gene3D - 233 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01528 Trre-Chr7 11496010 11499270 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01528 K13071 - gmx:100812162 919.072