Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01510 ATGCAGCCGAATTTGTTTCCATTCGGAACCGCGTTGAGTAATCCGTTTATTTTTAATGGTGATTTGAGTGAAGGAGGTGGAATCGATAGTTCTAGGGTTTTCGTTTTGCTTCCTTTCTTCTTGCTCTCTCAAGGAGGAGCAATGGATTTGTCTAAAGTCGGTGAGAAGATCTTGAGTTCTGTTAAGTCTGCTAGATCGCTTGGATTGCTTCCTTCTGTTTCTGATCGGCCTGAGGTTCCAGCTCGAGCTGCTGCTGCAGCTGCTGTAGCTCGTGCTCTTGCAGGGTTACCTCCTCATCAGAGGTATAGTTTTTCATCAAGTTCAGAAGAGCTGAGTTCAATATATGGAAGTAGACCTCATGGCCCTATAGTGGACGAACTGGAGGATGAATTCTACGAGGAGGATTTTGATCCAGTTAGGCATGTTTTAGAGCACGTTTCATCTGAAGAAAATGAGCTATTATATTTTGAAAAGCAGGCTGCCCTTAGATTAACACAACTGGATAAAGTAGCAGAGCGTTTGTCTCGCCATGTTATGGAGCATCATGAAGTAATGGTGAAGGGGATGAATTTGGTCAGGGAATTGGAGAAAGACTTAAGAATTGCAAATGTCATCTGTATGAATGGTAGAAGACACCTGACATCTTCTATGAACGAGGTTTCAAGGGATTTGATTGTGAATTCTTATTCAAAAAAGAAACACGCACTAATGGACATGCTTCCAGTCTTGAATGAACTTCGACGTGCATCAGAGATTCAATCAACACTTGAATCCCTTGTAGATGAAGGGAATTATTGGAAGGCATTTCAAGTCCTATCGGAGTATTTGCAACTCTTAGATAGTTTATCAGAGCTTTCTGCAATGCAAGAGATGAGTCGTGGTGTGGAGGTTTGGCTGGGAAGAACTTTGCAGAAGTTGGATGCTCTTTTATTGGATGTATGTCAGGAATTTAAGGAAGATGACTATATGACAGTAGTTGATGCGTATGCATTGATCGGGGATACCACTGGTCTTGCTGAAAAGATACAAAGTTTCTTCATGCAAGAAGTCATATCAGAGACGCACTCGGTGCTAAAGGCTATTGTGCATGAGGATGAAGAGGGACTTGCACAAAATAGTAGGCTCACTTACAGCGATCTATGCCTTCAGATACCTGATTCTAAGTTTAGGCAGTGCTTACTAAGAACATTGGCGGTTCTATTTGACCTCATATGTTCATACCATGAAATTATGGATTTTCAGCTAGAGAGTAAGGACTCAGCAGCACAAACTTCCGATAAGTGCAACGAAGACATTTCTTGTAGTTCAGGTGAGGCTCGGGAAGTTGATTCAGATGTAAGAGTTTGCAACAATTCTATATCCAGTTCTGGGGATGTGATACACGGCTCATCTTCTAGAAAGGAATCTTCAACAACCAGCTCACTGACTGAAATTGCTGGTTCACCATACAGTGATTCTCATGATCTAGTGAATGAGGCTAGAAAGGAGGAAATTTCAGCGTCAAGCATCGATTCGCCATGGTACCATCTTCGGAAAGAAGCTACAACATTTGTTTCTCAGACCCTTCAAAGAGGGCGCAAGAATCTGTGGCATCTCACAGCAAGCCGTGTCTCAGTGTTGCTTTCTTCTGCTGCAGCTTGTTCTGCTAGCATTCATCAATTCTTGAAAAACTATGAAGATCTGAGGGTATTCATTTTGACCGGGGAAGCCTTCTGTGGTATTGAAGTGGTTGAGTTCAGGCAGAAGTTGAAGGTTGTTTGTGAAAACTATTTCATTGCTTTTCATCGACAAAATGTTCATGCACTAAAAATGGTATTGGAGAAGGAGACTTGGTTAAAATTACCTCCAGAGACTGTTCAAATTATCAGTTTTGCTGGACTTATTGGTGATGGAGCACCATTGATTTCTTTATCTAACAGTAAATCAATGAATGTCAATGCAATCCATTCCAGTAATAAATCAGCGAACATGGTTCAGACTGGTGCGATGAAGAGTGGGTTCTCAAATTGGATTAAAAATGGAAATCCTTTTCTGCAAAAACTATCAACCTCCAAAGAAGGTCATGGTAATTCCCAATCTAATGGGTCAAGTTATGGTGAATTTGATGGAGGCTCAGCCAGCAACTATCACGATGATAGGATCACCCCTAGAAAGAATAACTCCGGTCAATCAAATGGTGCCAATTCTGTTTCAGAAGATGAAAATGAGGATCTTCTTGCTGACTTTATTGATGAAGACAGTCAACTTCCAAGTCGAAGTACTAAATCTCATCTTTCAAGATCTCACTCATCACATGGTAATGATGAAGAGAGTACAACCCAAACTGGTTCTTCTCTATGTCTCTTAAGGTCTATGGACAAATATGCAAGGCTTATGCAGAAATTAGAAGTAGTAAATGTTGAGTTCTTTAAGGGAATATGCCAGTTGTTTGAAATTTTTTTCCATTTTATATATGAAACATTTGGTCAGCAGAATACTAATTCAAGTGGAAAGAGCTCAGCTAACTCTCTTAATTATCGCTTGAGGACCGCCTTATCTAGAATAAACCAAGAAAGCGAAGAGTGGCTTAAACCCCTCTCATCTTCACCAACATCTTTAGGTTCATCATTTGTACATGGAGAGTTGACACCTACAAATCCTCCAAATATGAATTCTGGTCACCCCTCGGCGACAGCTTTTAGTCTTAAGGAAAGATGCGTGGCTGTTGACACTATATCTCTGGTTGCTCGAATTCTGAACAGAGCCAAAGCACATCTCCAATCAATGCTCTTGCAAAGTAATTCAACTGTACTTGAGGATTTCTATGTTCATCTGGTGGATGCTGTACCAGATCTTATAGAGCATGTGCATCACACAACAGTAAGACTACTGCTGCACATTAATGGGTATGTTGAACGCGTTGCCAATTGTAAATGGGAAGTAAAAGAACTTGGGATGGAGCATAATGGGTATGTTGATTTGCTGCTGGGGGAGTTTAAGCACTTTAAAACACGACTAGCTCATGGAGGAATTCGTAAAGAGACTCAAGACATATTGTTGGACTATGGGCTTGACATTATTGCGGAAACTCTTGTGGAAGGACTTTCACGGGTGAAGAGATGTAATGATGAAGGACGAGCTCTAATGTCATTGGATCTGCAGGTTTTGATAAATGGACTAAAGCATTTTGCGTCATTGAATGTGAAGTCCAAGCTACAAATGGTTGAAGCTTTCATTAAGGCTTACTACCTTCCGGAGACAGAGTATGTGCACTGGGCACGTGCGCATCCGGAATACACTAAAAGTCAGGTTGTTGGATTGGTCAACCTTGTTGCCTCTATGAAAGGTTGGAAGAGGAAAACCAGGTTGGAAATACTGGAAAAGATTGAGTAA 3372 0.4104 MQPNLFPFGTALSNPFIFNGDLSEGGGIDSSRVFVLLPFFLLSQGGAMDLSKVGEKILSSVKSARSLGLLPSVSDRPEVPARAAAAAAVARALAGLPPHQRYSFSSSSEELSSIYGSRPHGPIVDELEDEFYEEDFDPVRHVLEHVSSEENELLYFEKQAALRLTQLDKVAERLSRHVMEHHEVMVKGMNLVRELEKDLRIANVICMNGRRHLTSSMNEVSRDLIVNSYSKKKHALMDMLPVLNELRRASEIQSTLESLVDEGNYWKAFQVLSEYLQLLDSLSELSAMQEMSRGVEVWLGRTLQKLDALLLDVCQEFKEDDYMTVVDAYALIGDTTGLAEKIQSFFMQEVISETHSVLKAIVHEDEEGLAQNSRLTYSDLCLQIPDSKFRQCLLRTLAVLFDLICSYHEIMDFQLESKDSAAQTSDKCNEDISCSSGEAREVDSDVRVCNNSISSSGDVIHGSSSRKESSTTSSLTEIAGSPYSDSHDLVNEARKEEISASSIDSPWYHLRKEATTFVSQTLQRGRKNLWHLTASRVSVLLSSAAACSASIHQFLKNYEDLRVFILTGEAFCGIEVVEFRQKLKVVCENYFIAFHRQNVHALKMVLEKETWLKLPPETVQIISFAGLIGDGAPLISLSNSKSMNVNAIHSSNKSANMVQTGAMKSGFSNWIKNGNPFLQKLSTSKEGHGNSQSNGSSYGEFDGGSASNYHDDRITPRKNNSGQSNGANSVSEDENEDLLADFIDEDSQLPSRSTKSHLSRSHSSHGNDEESTTQTGSSLCLLRSMDKYARLMQKLEVVNVEFFKGICQLFEIFFHFIYETFGQQNTNSSGKSSANSLNYRLRTALSRINQESEEWLKPLSSSPTSLGSSFVHGELTPTNPPNMNSGHPSATAFSLKERCVAVDTISLVARILNRAKAHLQSMLLQSNSTVLEDFYVHLVDAVPDLIEHVHHTTVRLLLHINGYVERVANCKWEVKELGMEHNGYVDLLLGEFKHFKTRLAHGGIRKETQDILLDYGLDIIAETLVEGLSRVKRCNDEGRALMSLDLQVLINGLKHFASLNVKSKLQMVEAFIKAYYLPETEYVHWARAHPEYTKSQVVGLVNLVASMKGWKRKTRLEILEKIE 1123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01510 1123 Pfam Protein of unknown function C-terminus (DUF2451) 893 1123 IPR019514 -
Trre7g01510 1123 MobiDBLite consensus disorder prediction 745 777 - -
Trre7g01510 1123 MobiDBLite consensus disorder prediction 679 733 - -
Trre7g01510 1123 MobiDBLite consensus disorder prediction 718 732 - -
Trre7g01510 1123 MobiDBLite consensus disorder prediction 457 480 - -
Trre7g01510 1123 Pfam Vacuolar-sorting protein 54, of GARP complex 124 413 IPR019515 -
Trre7g01510 1123 PANTHER UNCHARACTERIZED 48 1123 IPR040047 GO:0032456|GO:0042147|GO:1990745
Trre7g01510 1123 MobiDBLite consensus disorder prediction 679 703 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01510 Trre-Chr7 11331648 11347228 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01510 K23288 - gmx:100788476 1858.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g01510 7 11331648 11347228 Trre7g01510 7 11331648 11347228 ECH