Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01486 ATGCATACCCTTGCTTCGCCTTCTTCTAACTATCTGAACCGGGTTCGTCCCTCGCTAAACCGGTTCGGTCCAACTCAAACCAGAGTAGTAACCGTTAAATGTGGTTACGGTTTCGATTATGCGAATTTTACGCAAGGATACGGCGTCGTTTCAAGCCGAGCCGATTGGCAAAGCTCATGCGCAATTTTAAGCAGCAAAGTCATTTCACAACAAGATGACGGTCATAACTCCGGTAACGGAAAAGAAAACAACCACGTCGGCGCCGTTAACGGCCATAACGCCTCCGTGACGGATCTCCAACTTGTTCCAATCGGTAACAACAAGCCACAGCCGCTCACAATCACTGACCTATCTCCAGCTCCGATGCACGGCTCACAGTTACGCGTTGCATATCAAGGTGTTCCCGGCGCGTATTCTGAAGCCGCCGCCGGAAAAGCTTATCCGAACAGCGAAGCTATGCCGTGTGATCAATTTGAAGTCGCGTTTCAATCGGTTGAACTCTGGATCGCCGATCGTGCAGTTTTACCGGTGGAAAATTCACTCGGTGGTTCGATTCATCGAAACTACGATCTCCTTCTCCGTCACAAACTCCACATCGTCGGAGAAGTTCAACTTCCGGTTCATCATTGTCTCCTCGCTCTTCCAGGAATCCGAAAAGAGTATCTCACACGTGTGATTTCGCATCCACAAGCATTAGCACAGTGCGAAAACACGTTAACAAAACTCGGTCTCAACGTAGCGCGTGAAGCCGTCGACGACACCGCCGGAGCAGCAGAGCCTCATCGTGGCCGTCCGATTAGAGTTGTGGATGATGAAAGTGAAGGAACTGCAAAACATTTTGAGTATATGTTTTATATTGATTTTGAAGCTTCTATGGCTGAAGTTAGAGCACAAAATGCACTTGCTGAGGTTCAAGAATTTACCTCTTTTTTAAGAGTTTTAGGGAGTTATCCTATGGATATGACACCATGGAACTCTCCTTCTACTTCTCATAGGGGAGATTAA 1005 0.4756 MHTLASPSSNYLNRVRPSLNRFGPTQTRVVTVKCGYGFDYANFTQGYGVVSSRADWQSSCAILSSKVISQQDDGHNSGNGKENNHVGAVNGHNASVTDLQLVPIGNNKPQPLTITDLSPAPMHGSQLRVAYQGVPGAYSEAAAGKAYPNSEAMPCDQFEVAFQSVELWIADRAVLPVENSLGGSIHRNYDLLLRHKLHIVGEVQLPVHHCLLALPGIRKEYLTRVISHPQALAQCENTLTKLGLNVAREAVDDTAGAAEPHRGRPIRVVDDESEGTAKHFEYMFYIDFEASMAEVRAQNALAEVQEFTSFLRVLGSYPMDMTPWNSPSTSHRGD 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01486 334 ProSiteProfiles Prephenate dehydratase domain profile. 128 312 IPR001086 GO:0004664|GO:0009094
Trre7g01486 334 PANTHER PREPHENATE DEHYDRATASE P PROTEIN 260 325 - -
Trre7g01486 334 MobiDBLite consensus disorder prediction 71 90 - -
Trre7g01486 334 Gene3D - 212 264 - -
Trre7g01486 334 Gene3D - 123 211 - -
Trre7g01486 334 SUPERFAMILY ACT-like 278 320 IPR045865 -
Trre7g01486 334 FunFam Arogenate dehydratase 123 212 - -
Trre7g01486 334 Pfam Prephenate dehydratase 129 260 IPR001086 GO:0004664|GO:0009094
Trre7g01486 334 SUPERFAMILY Periplasmic binding protein-like II 128 260 - -
Trre7g01486 334 Gene3D - 265 315 - -
Trre7g01486 334 CDD PBP2_Ct-PDT_like 128 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01486 Trre-Chr7 10982134 10983414 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01486 K05359 - gmx:100800074 386.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g03731 11 50631875 50633099 Trre7g01486 7 10982134 10983414 PCT