Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01481 ATGGTTTTAGTAACAACAACAATACCTTCTTGTTCCTCTCTACTACTACTACATTATTCCAAAACCAGATACGTCGTCGTTGGATGTACTAGTAGAAGCATTGTTCATGAGATAGATGATGTGAAATCATCAGAGAATGTGTTTCCTCCATTGAAAACAGCAAAGAGAGTTGTGCTTGTTAGACATGGACAGAGTACGTGGAATGCTGAAGGGAGGATTCAAGGTAGTTCTGATTTCTCTGTTCTTACTAAAAAAGGTGAGTCTCAAGCTGAAACTTCACGTCAAATGCTCTTTGATGATAACTTCGACGCTTGTTTCTCCAGCCCTTTGGCGCGATCAAAGAGAACTGCTGAAATCATTTGGGGACCTCGCCAAGACCAAATTATTCCCGAGTTTGACCTACGGGAAATCGATTTGTATTCCTTTCAAGGTTTGTTGAAGGAAGAGGGAAAAGCGAGATTTGGTCCGGCCTTTCATCAATGGCAGGTAGATGCTTCGAATTTCATCATTGACGGTCATTATCCTGTGAGAGAGCTATGGGATCGTGCTAGGAACTGCTGGACTAAAATCCTAGCTCATGATAGCAGGTCTGTTCTTGTGGTTGCTCACAATGCTGTTAATCAGGCTCTTGTTGCAACAGCAATTGGTTTGGAATCAGATTATTTCAGAACTTTACTTCAGAGCAATTGTGGTGTTAGTGTGCTTGATTTCTCCCCAAGACCGGACGGTGGTTCTCCCCATATCTGTCTTAACCGCTTAAACCAGACGCCGGGTTCACCTGTTGCCGGAGGGAAATCTGGAGGTAGAGAGGCAAGTAAGCGGATTGTTCTTGTTTGTAACGGAACTACTCAAGGAAATACAGAGGGTGGTTTGCTCTTTGCTGGTGATCAACCATTGAACATGCTTGGTGTTATACAGTCTCAGAAATCTGCAGAACTACTTCTTGATTTGTCCGTGAGTTCCATAATTAGCAGTCCTAACAAATCTTGTATTGAGACAGCCATGTCCATATCCCAGGTACAAGAGGCTGCAGATTGCTTGGGTGCTGACTGTGTGCCACGCTACGTTGAAACAAAGCAAATGGGGTACCTTGATATTGAAGCTATCTTAAAACAATCCAAAATGGATGTATCCAGTTTACCGCCATTTCAGCCTGGATGGTTAAATAAAGTTGACGATGAATTGAGAACAACAATATGGGATCAATCTGGAAATGCCTGGAAATCCCTGTTGGACGAAATATCCGATGAATCTAAATCAGGAGAAGTTATAGTTGCAGTTTCTCATCCTGCGATTCACATAGGACTAATAGCGCACTGCCTTAATTTAACGAAAGAATGGCTGGGATCGTTTCATCTTGACGCAGGAAGCATTAGCGTCCTCGACTTCCCCGATGGACCTAAGGGAAGCGGCGTAATCAGGTGCATAAATTATACTGCACACTTAGGGAGATGGTCCATCCCTATTACAAGACCAACAACAGAAGATGTTGAAGATTTTTAA 1503 0.4291 MVLVTTTIPSCSSLLLLHYSKTRYVVVGCTSRSIVHEIDDVKSSENVFPPLKTAKRVVLVRHGQSTWNAEGRIQGSSDFSVLTKKGESQAETSRQMLFDDNFDACFSSPLARSKRTAEIIWGPRQDQIIPEFDLREIDLYSFQGLLKEEGKARFGPAFHQWQVDASNFIIDGHYPVRELWDRARNCWTKILAHDSRSVLVVAHNAVNQALVATAIGLESDYFRTLLQSNCGVSVLDFSPRPDGGSPHICLNRLNQTPGSPVAGGKSGGREASKRIVLVCNGTTQGNTEGGLLFAGDQPLNMLGVIQSQKSAELLLDLSVSSIISSPNKSCIETAMSISQVQEAADCLGADCVPRYVETKQMGYLDIEAILKQSKMDVSSLPPFQPGWLNKVDDELRTTIWDQSGNAWKSLLDEISDESKSGEVIVAVSHPAIHIGLIAHCLNLTKEWLGSFHLDAGSISVLDFPDGPKGSGVIRCINYTAHLGRWSIPITRPTTEDVEDF 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01481 500 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 59 68 IPR001345 GO:0003824
Trre7g01481 500 Pfam Histidine phosphatase superfamily (branch 1) 57 239 IPR013078 -
Trre7g01481 500 Pfam Histidine phosphatase superfamily (branch 1) 275 466 IPR013078 -
Trre7g01481 500 CDD HP_PGM_like 56 243 IPR013078 -
Trre7g01481 500 SMART PGAM_5 274 436 IPR013078 -
Trre7g01481 500 SMART PGAM_5 56 210 IPR013078 -
Trre7g01481 500 SUPERFAMILY Phosphoglycerate mutase-like 55 251 IPR029033 -
Trre7g01481 500 PANTHER BROAD-SPECIFICITY PHOSPHATASE YOR283W-RELATED 270 466 - -
Trre7g01481 500 CDD HP_PGM_like 274 474 IPR013078 -
Trre7g01481 500 FunFam Putative 2-carboxy-D-arabinitol-1-phosphatase 266 486 - -
Trre7g01481 500 Gene3D - 267 486 IPR029033 -
Trre7g01481 500 FunFam Phosphoglycerate mutase 55 259 - -
Trre7g01481 500 SUPERFAMILY Phosphoglycerate mutase-like 273 487 IPR029033 -
Trre7g01481 500 Gene3D - 55 242 IPR029033 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01481 Trre-Chr7 10946019 10952104 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01481 K22200 - gmx:100794084 759.985
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g01481 7 10946019 10952104 Trre7g01481 7 10946019 10952104 ECH