Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01462 ATGGATCAATTTGGAAGCATTACTCACTTCCTTCAAGATAAGAATATTTTGGTTCTAGGTGCAACTGGTTTCCTTGCAAAAATATTTATAGAGAAGATATTGCGAGTCCAACCGAATGTGAAAAAAATTTATCTTCTTTTAAGAGCTACGGATGTTGAATCTGCCACTAGAAGAATGCAGAATGAGATTTTACGGAAAGACTTATTCAAATTGCTGAAGGAAAATCTTGGTGCAAAGTTCAATAGCTTTATCTCAGAAAAATTGACTTTAGTGCCTGGGGACATTTCCCATGAAGACTTTAATTTAAAGGAGTCAAATCTACTTAAAGAGTTATATGATCAAACTAATGTCATTGTGAATTTGGCCGCGACAACTAACTTTGATGAAAGATATGATGTTGCATTGGGTTTAAATACATTTGGAGTTAAGCATGTCTTAAACTTTGCCAAAAATTGTATTAACCTAAGGGTGCTTGTCCATGTATCCACAGCATACGTATGTGGGGAGAGAGGAGGACTTATAGTAGAGGATCCGTACCAAATGGGTGTATCACTAAATGGAGTATCAGGACTAGACATTGATGTGGAAAAGAAAATTATTGAGGAGAAATTGAACATGCTTCGACAAGAGGGAGCCACTGAAAATGATATCAAAGTTGCCATGAAGGATTTGGGTATGAAAAGAGCAAATTTATATGGATGGCCAAACACGTACGTCTTTACAAAGGCAATGGGAGAAATGCTTGTGGGAACTATGAAGGAAAAAATATCTACTGTCATTGTGCGTCCTACAATCATTACCAGCACTTATAAAGAACCTTTCCCTGGTTGGGTCGAAGGAGTAAGAACCATAGACAGTTTAATTGTTGCTTATGGTAAAGGAAAATTAACATGTTTCCTTGCAGACCTTGATGCAGTTTTTGATGTGATTCCTGCTGATATGGTGGTGAATGCAATGCTAGTGGCTATGGTGAGTCATGCAAATCAACCTTGTGATAGCATCTATCATGTGGGTTCCTCTGTTGGGAATCCAGTTAGATATTCGAACCTCAGAGATTACAATTTCAGATATTTTACTGCAAAACCATGTTTAGACAAGGAAGGAAAAGCCATCAAAGTTGGCAGAGTTACAGTATTGGAAAACATGAATAGCTTCCAAAGATACATGTTCATTCGATACTTGCTTCCATTAAAGGGGCTAAAGCTAGTCAATGAAGCCTTCTGTCACTATTTTCAGGGCATGTATTTCGATATCAACAGGAAGGTCCATACTGTGATGCGCTTGGTTGACCTTTATAGACCCTATTTGTTCTTTGATGGCGTATTTGATAATATGAATGCAGAGAAGTTGCAAATAGCAGCAAGACAAAGTGGAGTAGAGATGGATATGTTTTACTTTGATCCAAAAATGATTAACTGGGAAGACTACTTCATGAACATCCACATTCCCGGCATTGTCAAATACTCCTTCAAGTGA 1476 0.3753 MDQFGSITHFLQDKNILVLGATGFLAKIFIEKILRVQPNVKKIYLLLRATDVESATRRMQNEILRKDLFKLLKENLGAKFNSFISEKLTLVPGDISHEDFNLKESNLLKELYDQTNVIVNLAATTNFDERYDVALGLNTFGVKHVLNFAKNCINLRVLVHVSTAYVCGERGGLIVEDPYQMGVSLNGVSGLDIDVEKKIIEEKLNMLRQEGATENDIKVAMKDLGMKRANLYGWPNTYVFTKAMGEMLVGTMKEKISTVIVRPTIITSTYKEPFPGWVEGVRTIDSLIVAYGKGKLTCFLADLDAVFDVIPADMVVNAMLVAMVSHANQPCDSIYHVGSSVGNPVRYSNLRDYNFRYFTAKPCLDKEGKAIKVGRVTVLENMNSFQRYMFIRYLLPLKGLKLVNEAFCHYFQGMYFDINRKVHTVMRLVDLYRPYLFFDGVFDNMNAEKLQIAARQSGVEMDMFYFDPKMINWEDYFMNIHIPGIVKYSFK 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01462 491 CDD FAR-N_SDR_e 14 362 - -
Trre7g01462 491 Gene3D - 8 386 - -
Trre7g01462 491 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 339 IPR036291 -
Trre7g01462 491 PANTHER MALE STERILITY PROTEIN 2-RELATED 7 489 IPR026055 GO:0080019
Trre7g01462 491 Pfam Male sterility protein 392 491 IPR033640 -
Trre7g01462 491 CDD FAR_C 391 488 IPR033640 -
Trre7g01462 491 Pfam Male sterility protein 20 319 IPR013120 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01462 Trre-Chr7 10774056 10780300 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01462 114 490 Acyl Lipid Metabolism Gene Families AT4G33790 60.743 2.02e-177 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01462 K13356 - gmx:100788994 785.408