Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01461 ATGGAGTTAGGAAGTGTACTCCATTTTCTTCAAGATAAGACCATTTTAATCACTGGTGCCACTGGCTTTCTTGCTAAGATTTTGTTGGAGAAAATATTGAGAGTTCAACCGAATGTTAAGAAGATTTATCTTCTTTTAAGAGCTGCAGATGCAAAAGCTGCTACTCATCGTTTTCACAATGAGATAATAGGGAAAGACTTGTTTAAATTACTAAAGGAAAAATTGGGGGCAAATTTTACTACATTTCTTTCGGAAAAATTGACTCTAGTGCCCGGAGATATTTCTCTTGAAGACTTGGGATTGGAAGATTCTATTCTAAAGGAAGAAATTTACAATCAAACAGATGTTATTGTTAATTTAGCTGCAAATACCAACTTTGATGAAAGGTATGATATATCTTTGGGACTAAATACTTTTGGGATTAAGTATATTATCAACTTTGCCAAAAAATGCAATCAACTCAAGGTTCTTGTGCATGTATCAACAGCCTATGTATGTGGGGAAGGAGAAGGGTTGATATTAGAGAAACCACATCAATTGGGCCAGTCCTTAAATGGTGTAAATGGATTAGACATTGATGTAGAAGTGAAAGTGGTGCGAGATAAATTGAGTGAGCTACAACAGCTGGGAGCAACAGAAGATGAAATTAAAATTGTCATGAAGAACTTAGGTCTTACCAGGGCAAAGTTATATGGATGGCCAAACACATATGTATTCACAAAGGCAATGGGAGAAATGCTTTTAGGGCAATTGAAAGAAAATTTGTCCGTTGCTATTGTTCGTCCTGCAATTGTCACAAGTACATTCAAAGAACCATTCCCTGGTTGGTCCGAAGGTGTAAGGACAATTGACAGTTTAGCCATAGCTTATGGAAAAGGAAAATTAACATGCTTCCTTGGAGATCTTAATGCAATTGTTGATGCGATACCAGCTGACATGGTAGTGAATGCAATATTAGTTGCCATTGTAGCTCATGCAAATCATCCTAGTGTAACTATATATCATGTTGGTTCCTCTGTTAGAAGACCTCTCACGTATAAAAATCTTCAAGAATTTGGCTTTAGACATTTCTCGGTAAAACCATGGATAAACAAAGATGGAAAGCCGGTTAAAGTTGGCAAAGTTACGGTGTTTAGCAATATGGATTACTTCAGAAGATTTATGTTCGTTCGCTACCTTCTTATGTTAAAGGGACTTGAGCTAGCTAATACTGCACTTTGCCAATATTTCCAAGGGACATATCTTGATCTCAAAAGGAAGATTCAGATTGTGAATCGGTTGGTGGACCTTTACATGCCTTACTTGTTCTTTAAGGGCGTATTTGATGACATGAATACAGAGAAGTTGAGAGTGGCAGCAAGACAAGGTGGAGTGGAGACAGATTTGTTTTACTTTGATCCTAAAGTAATCAATTGGGATGATTATTTCTTGAACATTCACCTCCCTGGTGTGGTCAAATACATTCTGAAGTGA 1473 0.37 MELGSVLHFLQDKTILITGATGFLAKILLEKILRVQPNVKKIYLLLRAADAKAATHRFHNEIIGKDLFKLLKEKLGANFTTFLSEKLTLVPGDISLEDLGLEDSILKEEIYNQTDVIVNLAANTNFDERYDISLGLNTFGIKYIINFAKKCNQLKVLVHVSTAYVCGEGEGLILEKPHQLGQSLNGVNGLDIDVEVKVVRDKLSELQQLGATEDEIKIVMKNLGLTRAKLYGWPNTYVFTKAMGEMLLGQLKENLSVAIVRPAIVTSTFKEPFPGWSEGVRTIDSLAIAYGKGKLTCFLGDLNAIVDAIPADMVVNAILVAIVAHANHPSVTIYHVGSSVRRPLTYKNLQEFGFRHFSVKPWINKDGKPVKVGKVTVFSNMDYFRRFMFVRYLLMLKGLELANTALCQYFQGTYLDLKRKIQIVNRLVDLYMPYLFFKGVFDDMNTEKLRVAARQGGVETDLFYFDPKVINWDDYFLNIHLPGVVKYILK 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01461 490 Pfam Male sterility protein 392 490 IPR033640 -
Trre7g01461 490 CDD FAR_C 390 489 IPR033640 -
Trre7g01461 490 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 13 365 IPR036291 -
Trre7g01461 490 PANTHER MALE STERILITY PROTEIN 2-RELATED 7 490 IPR026055 GO:0080019
Trre7g01461 490 CDD FAR-N_SDR_e 13 361 - -
Trre7g01461 490 Pfam Male sterility protein 17 318 IPR013120 -
Trre7g01461 490 Gene3D - 8 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01461 Trre-Chr7 10750493 10760100 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01461 112 489 Acyl Lipid Metabolism Gene Families AT4G33790 59.259 1.01e-177 502
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01461 K13356 - gmx:100798338 837.41