Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01445 ATGCCTAAATCTTTTGAAGAAAAAGATGGATCTGAATCAGAAACACCAAATTTTTGTTGCATTGATTCATTCACTCATTTAGCATCAACCAAATCTAAGAGTAACAATTTTCCGATGAAACGCACCGTTCGTCCTTTCTTCTTTCTTCTCATTCTTCTCGTTTTCATCGCTACGTTAACCTCACGCGCTATTCTACGTAAAGGTATACTCTCAATTGAGCTCGAAACGCGTGTTTTCACTCGCGATCCACCGTCGTTAAACTCCACTTTGCTCAAACACGCCGCCGTTGAGATCGGCGAGGAAAAATCACGGCTAGAGATTCAGCAGCTTCTTGATGGTAATTTTGCTAGTCAAGCACGGCACAGGACATTCGTTTCGTGGCGGAGATTCATTCACCATGACGGTGGTGATAGAAACTTACCGGCGACACTCCGGTCGCCACTATTCTATCGGTATTGGCTTGATTTTCGGCGAGTTTTGCATGATTGGGCGAGGAAGCGTCGGTTTCAACCAGGAATAATGTCGGAATTAACTCGATCGGTGAAGATTCCGCTCGATCGGTATAACAAAGTTAATGCTAATGTTGTTGATTCTGGTGATAAAAAATACTCTTCTTGTGCTGTTGTTGGTAACAGTGGAATTTTGCTTAATAGAAACTATGGTTCATTAATTGATGCACATGAATTTGTTATAAGATTAAACAATGCTAGGGTTGATAACTATGAATCAAAAGTTGGTAAAAAAACAAGCATTTCATTTGTGAATAGTAACATTTTGCATTTATGTGCAAGAAGATCAGGGTGTTTTTGTCACCCTTATGGCCCTAATGTTCCTATTGTTATGTACATTTGTCAAGCTGTGCATTTCTTGGATTATACTGTTTGTAATGCTTCACATAAGTCTCCATTGTTGGTGACAGATCCTAGGTTTGATGTGTTATGTTCTAGGATTGTGAAGTATTACTCATTGAAGAGATTTGTAGAGGAAACAGGGAAGGGTTTGGAACAATGGGGTTCAGCTCATGATGGTGCTTTGTTTCATTATTCTTCTGGTATGCAAGCTGTTATGTTGGCTTTAGGTGTATGTGATAAAGTTAGTATTTTTGGATTTGGTAAATCACCTTCTGCTAAACATCATTATCATACAAACCAGAAAGCTGAACTCCATTTGCATGATTATGAAGCTGAATATGCTTTTTATAGTGATCTTGTCGATGGACGTAAGCCTATACCGTTTATATCGGAGAAGTTTAAGATTCCTCCTGTTGTAATGTATAGATGA 1281 0.3888 MPKSFEEKDGSESETPNFCCIDSFTHLASTKSKSNNFPMKRTVRPFFFLLILLVFIATLTSRAILRKGILSIELETRVFTRDPPSLNSTLLKHAAVEIGEEKSRLEIQQLLDGNFASQARHRTFVSWRRFIHHDGGDRNLPATLRSPLFYRYWLDFRRVLHDWARKRRFQPGIMSELTRSVKIPLDRYNKVNANVVDSGDKKYSSCAVVGNSGILLNRNYGSLIDAHEFVIRLNNARVDNYESKVGKKTSISFVNSNILHLCARRSGCFCHPYGPNVPIVMYICQAVHFLDYTVCNASHKSPLLVTDPRFDVLCSRIVKYYSLKRFVEETGKGLEQWGSAHDGALFHYSSGMQAVMLALGVCDKVSIFGFGKSPSAKHHYHTNQKAELHLHDYEAEYAFYSDLVDGRKPIPFISEKFKIPPVVMYR 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01445 426 PIRSF Sialyl_trans 39 411 IPR012163 GO:0006486|GO:0008373
Trre7g01445 426 Pfam Glycosyltransferase family 29 (sialyltransferase) 192 405 IPR001675 GO:0006486|GO:0008373
Trre7g01445 426 Gene3D Glycosyl transferase family 29 151 409 IPR038578 -
Trre7g01445 426 PANTHER BETA-1,6-GALACTOSYLTRANSFERASE GALT29A 39 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01445 Trre-Chr7 10641043 10642323 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01445 167 391 Glycosyltransferase AT3G48820 22.368 2.18e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01445 K00786 - gmx:100789506 677.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g01445 7 10641043 10642323 Trre7g01445 7 10641043 10642323 ECH