Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01436 ATGATGGAACATCTTCCTGTTGAAGTCATTGGGAACATATTGTCCCATCTCAAGGCTGCAAGAGATGTGGTTATTGCCTCAGCAACATGCAAAAAATGGCGAATTGCGTGCTGCAAACATCTCCACACAATCTCATTTAATTCCAATGATTGGCCTGTTTATCGCGATTTAACAACGACCCGTCTCGAGATTTTGATCACACAGACAATTTTTCAGACTTCAGGGTTGCAGTCCCTTACCATTTTGATGGAAGATGTTGATGAATTCTCGGCTTCTGCTGTTATTGCTTGGCTTATGTACACAAGGGAGACTTTGAGGCAGTTGTTTTATAATGTGAAAACGATGCCGAATGTTAATATTCTCGAGATATGTGGTAGACATAAGCTGGAAATACTTGATTTGGCGCATAATTCTATTGTTGGGGTTGAGCCTAATTATCAGAGGTTCCCTTGTTTGAAATCTCTTTCGCTGAGTTCTGTTAGTATATCTGCGTTGGATTTGAATCTGTTGGTGTCTGCGTGTCCGAGGATTGAGGTTTTGGAGCTTGTTAATCCAGAGATTGCAATGTCTGATGCGCAGGTGAGCGTTGAATTGAGTAGTTCGACGTTGAAGAGTGTTTACGTTGAAGCAATCAGTTTGGATAAGTTCATATTGGAGGCTGATGGGATTGAGTGTCTGCATTTGAAAGATTGTGCGCTTGAGGATTTTGAACTAATTGGTAAGGGGACTTTGAAGAATTTCAGGATTGACGATGTTAGTGTTATACATCTTGATATCGGTGATATTGTTGAGAATCTCGAGAGTGTGGATATCAGCAACTTCACAATTATATGGCCAAAATTTTACCAGATGATTTCAAGATCGTCAAATTTGAAGAGACTTAGGCTTTGGGATGTGATGTTTGATGATGAGGATGAGGTTGTGGATTTGGAAACTATTGCTACTTGCTTTCCACACCTGAGTCATTTATCGCTGAGTTATGATGTGAGAGATGGAGTTCTTCACTATAGTTTACAAGGATCTTCTCATCTGGAGAATGTTGTTGTCTTGGAGCTTGGATGGAATGTGATTAATGATCTTTTCTCCCAATGGGTTGAGGGGCTGCTTAAGCGATGCCCTATTCTCAAGAAACTAGTCATTCATGGTGTTGTTTCCGAGGCGAAGTCTGATGAAGAATGCAAGATGTTAGCCAATTTCACTACATCCATGATTGAGCTGATGAGGAGATACATAGATGTCGATCCACATTTTAAATTTGAATAG 1263 0.403 MMEHLPVEVIGNILSHLKAARDVVIASATCKKWRIACCKHLHTISFNSNDWPVYRDLTTTRLEILITQTIFQTSGLQSLTILMEDVDEFSASAVIAWLMYTRETLRQLFYNVKTMPNVNILEICGRHKLEILDLAHNSIVGVEPNYQRFPCLKSLSLSSVSISALDLNLLVSACPRIEVLELVNPEIAMSDAQVSVELSSSTLKSVYVEAISLDKFILEADGIECLHLKDCALEDFELIGKGTLKNFRIDDVSVIHLDIGDIVENLESVDISNFTIIWPKFYQMISRSSNLKRLRLWDVMFDDEDEVVDLETIATCFPHLSHLSLSYDVRDGVLHYSLQGSSHLENVVVLELGWNVINDLFSQWVEGLLKRCPILKKLVIHGVVSEAKSDEECKMLANFTTSMIELMRRYIDVDPHFKFE 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01436 420 SUPERFAMILY F-box domain 1 59 IPR036047 GO:0005515
Trre7g01436 420 Gene3D - 1 44 - -
Trre7g01436 420 PANTHER F-BOX PROTEIN-LIKE 3 382 - -
Trre7g01436 420 Pfam F-box-like 3 40 IPR001810 GO:0005515
Trre7g01436 420 CDD F-box_SF 3 38 - -
Trre7g01436 420 Gene3D Ribonuclease Inhibitor 112 405 IPR032675 -
Trre7g01436 420 SMART fbox_2 5 46 IPR001810 GO:0005515
Trre7g01436 420 SUPERFAMILY RNI-like 68 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01436 Trre-Chr7 10565763 10567025 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01436 - - gmx:100804357 735.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g01436 7 10565763 10567025 Trre7g01436 7 10565763 10567025 ECH