LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trre7g01427	ATGGCGGTGAGGGCCACAGTGTCACGCTTCCCAATTGACACAGACGCACGCGAAGGTTCCGGCCTCCTATGGGGAGTAACCGTCGCACCCTTTGCCGCCGTTGACGAAAACGGCCAATCTCCGGTATACGGATCCGGCGGCGACCTCTTACCTCGTTGCGAGAATTGTTGGGCTTACTTCAACACCTACTGTGAACTTGAACAATGGTCATGGTCTTGCTCTCTCTGTGGCAATCTCAATGGTCTCTCTTCCGACGCAATCGAACGCTATTCTCGTCCTCAATCTTGTGCTGAAATGATGTCTTCATTTGTAGATCTTGAATTGCCTACGCAAGAATCGTCTGATGATGCTGCTGCATTGCAAGCTTGTCCTGTTTACGTTGCTGCTGTTGACTTGTCATCTTCTGAGGAGTTTCTGGAACTCACTAAAAGTGCATTGCTGGCAGCTATGGAAGCTCTTGCTCCTGGTTCACTTTTTGGACTTGCTACATTCAGCCATAAACTAGGACTGTATGATGTTCAAGGTCCAATACCTGTGGTGAAAAATGTTTTCATCCCTCCTGATGCAGCGGGCACCTTATCAATTGAGCTTGAAGATGTCATGCCTTTGTTACAATTTCTGGCTCCCGTTGATACTTGTAAGGACCGTATTGCATCTGCACTTGAATCACTTAGACCAACAACTTCATGGGAGAGAACCACAGGATCAGGTCAAGGAATGGAGGGTGTTCTGCTAGGTGGGCGCGGTTTTGGGGTGGCAATGGAAGCCCTCTGCAGTTACCTTGGATCTGAATATGGAAACACTTTTGCATTAGCTAGAATCTTTGCGTTTTTGTCTGGTCCTCCTGATTATGGAGCTGGACAATTGGACACCAGACGATATGGCGAGCAATATGCAAGCAAAGGGGAGGATGCAGATCGCGCTCTACTCCCGGAACAGACACCATTTTATAAAGATCTGGCTGCTGTTGCTGTTCAAGCAGGTGTATGTGTTGACATATTTGCTGTAACAAATGAGTATACTGATTTGGCATCACTAAAATTTCTGAGTATTGAAAGTGGGGGCTCCTTATTTTTTTATACAAGTACCGAAGATTCAACTTTGCCTCAGGACATGTATCGTATGCTGAGTAGGCCATATGCTTTTGGTTGTGTCCTGCGATTAAGAACCTCAACTGAATTTAAGCCTGGAAATTCTTATGGTCACTTCTTTCCAGATCCAGAGTATGAAAATGTTCAACACGTCATATGCTGTGATTCTTATGCTACATATGCTTATGACTTTGTGTTTGAGAACAACATTGGATTTTCAAGAAGTAAAGCAGATGTTCCTACACTCCAGATTGCATTCCAGTACTCAGTTGTAGTTCCTCCTCAGGAGCTTTCCAATTCAGGCGAGGTCTCCACAAGCAGAACCAAACATCATTCCCTTCAACGCCGGCTAAGGATCCGAACAGTGCAGTTTGGCGTTGCTCAGAACATTAACGAGCTTTACGACAGCTGTGATCCTGAAGTTGTTCTATCTTTGCTCGTGCACAAGGTTATACTTGCCTCTTTGGAGGAAGGAGTTCGGGAGGGTAGACTTTTGCTTCAAGAATGGCTAGTGATCCTTACAGCTCAGTACAATGATGCTTATAAACTTATTCAGTATAGTAATGGAAGTTCAATAAGATCTCAGCTTGATGTTGCCTTCTCTCAATGTCCTCAACTGCAGCCGCTACCACGGCTAATCTTTGCTCTCCTTCGAAACCCTCTTCTTCGCTTTCACGAAGAAGGTGTTCATCCTGACTATCGCATATATCTTCAATGCTTGTTTAGTGCGTTGGAACCGAGTTCCCTTCATCGTGCTGTGTATCCAGTATTGACTTCATATGCTACTCCAGACAAACAAGCATATCCTCGCCATTCCTTGAGTCGTGCTGCACTGCTTACCAGTGGCAGTCCAATATTTTTCCTGGATGCGTTCACAATTCTGATTGTGTTTTATTCTTCAACTGCAGACCCAACACTTCCTTTTCCTCCGCCCCATGATTGTTTGTTAAGAAATACAATCAACAAATTGAAGAAAGAGAGATGTATCACTCCTAAACTCATTTTCATTCGAGGAGGGCAGGACGATGCCTCAATTTTCGAGAACTTTCTGATCGAAGAGCAGGATGTTGATGGAAGCGGTCTTACAAGTGTGATGGGCTTCGTTTCCTTCCTTGAAGATATAACTCAGAAAGTTTTGGAATTCATGAAATAG	2244	0.447	MAVRATVSRFPIDTDAREGSGLLWGVTVAPFAAVDENGQSPVYGSGGDLLPRCENCWAYFNTYCELEQWSWSCSLCGNLNGLSSDAIERYSRPQSCAEMMSSFVDLELPTQESSDDAAALQACPVYVAAVDLSSSEEFLELTKSALLAAMEALAPGSLFGLATFSHKLGLYDVQGPIPVVKNVFIPPDAAGTLSIELEDVMPLLQFLAPVDTCKDRIASALESLRPTTSWERTTGSGQGMEGVLLGGRGFGVAMEALCSYLGSEYGNTFALARIFAFLSGPPDYGAGQLDTRRYGEQYASKGEDADRALLPEQTPFYKDLAAVAVQAGVCVDIFAVTNEYTDLASLKFLSIESGGSLFFYTSTEDSTLPQDMYRMLSRPYAFGCVLRLRTSTEFKPGNSYGHFFPDPEYENVQHVICCDSYATYAYDFVFENNIGFSRSKADVPTLQIAFQYSVVVPPQELSNSGEVSTSRTKHHSLQRRLRIRTVQFGVAQNINELYDSCDPEVVLSLLVHKVILASLEEGVREGRLLLQEWLVILTAQYNDAYKLIQYSNGSSIRSQLDVAFSQCPQLQPLPRLIFALLRNPLLRFHEEGVHPDYRIYLQCLFSALEPSSLHRAVYPVLTSYATPDKQAYPRHSLSRAALLTSGSPIFFLDAFTILIVFYSSTADPTLPFPPPHDCLLRNTINKLKKERCITPKLIFIRGGQDDASIFENFLIEEQDVDGSGLTSVMGFVSFLEDITQKVLEFMK	747

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trre7g01427	747	Gene3D	von Willebrand factor, type A domain	123	380	IPR036465	-
	Trre7g01427	747	PANTHER	SEC24-RELATED PROTEIN	3	740	-	-
	Trre7g01427	747	Pfam	Sec23/Sec24 trunk domain	123	375	IPR006896	GO:0006886\|GO:0006888\|GO:0030127
	Trre7g01427	747	Pfam	Sec23/Sec24 helical domain	502	614	IPR006900	GO:0006886\|GO:0006888\|GO:0030127
	Trre7g01427	747	SUPERFAMILY	Helical domain of Sec23/24	502	618	IPR036175	GO:0006886\|GO:0006888\|GO:0030127
	Trre7g01427	747	Gene3D	-	31	102	-	-
	Trre7g01427	747	SUPERFAMILY	Zn-finger domain of Sec23/24	46	111	IPR036174	GO:0006886\|GO:0006888\|GO:0008270\|GO:0030127
	Trre7g01427	747	SUPERFAMILY	beta-sandwich domain of Sec23/24	3	501	-	-
	Trre7g01427	747	Gene3D	Sec23/Sec24 helical domain	474	631	-	-
	Trre7g01427	747	SUPERFAMILY	vWA-like	124	378	IPR036465	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trre7g01427	Trre-Chr7	10506909	10513247	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trre7g01427	-		-	tpra:123882472	1442.56

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Trre7g01427	7	10506909	10513247	Trre7g01427	7	10506909	10513247	ECH