Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01415 ATGGCTATGGCGCCAAGAAAACCTCGCAACCGTGAAATTCTCTTCGACTCCGTCATCGCTCTCGTTTTCATCCTCGTCGCTTGTGTCGACCTCTGTGACGGCGCCACCGTTGTTGATGTTTACCGATTAATTCAATACGATATGTCTGGTGTTCCTTTTGGATCTCGACTTTCAAGCCTTAATCATCACGCTGCTTCTCTTCATTTCTCTCCTAATGCTGATCTCTCTCGTACTGTTCTTCTTATACCTCTTCGTGAACTCAACATGTCCTTTGTTCAAGAGTATATTGTTGCTAGCAAGCCTTTGGGGGGTTTAATATTTTTGCTGCCCCGGATGTTTAGTTTTGAAAACAAAGGTGGCGTGGGAAGTAATCATGATGATGGGAACAAAGATCCGCTGAAGAATGTGCTGGCCAAGCTTGAACAAATACTTATACACACAAACTTACCTTATCCTGTTTATTTTGCTTTTGAGGACGACAACATTGACAACGTGTTATTGGATATCAAGAAGAATGATGCCTCTGGTCAGCCTGCTACTGCAACTACGGGAGGGTACAAATTTGTTATTTCAGCCACTGAACCAAAGAAAGTTGGATCTCCACCCATTACAAATATTCAGGGATGGTTGGCAGGGCTGAAGACCGATGGCGATTCTCATCAATTACCAACCATTGCGATAGTGGCATCATATGACACCTTTGGTGCTGCTCCGGCATTATCAGTGGGAAGCGATAGCAATGGAAGTGGCATTGTGGCTCTTCTTGAAGTAGCTAGATTATTTTCTCTTTTATATTCTAATCCAAAGACAAGAGGACAATACAATCTTCTGTTTGGGCTAACGTCTGGTGGGCCTTACAACTACAATGGAACCCGCAAGTGGCTTCAGAGCTTTGATCAACGTCTGCGTGAGAGCATTGACTATGCTATTTGCTTAGATAGTATTGGCTCATGGGAAAATGAACTGTGGATTCACGTGTCTAAACCTCCAGAGAATGCCTTTATTAAACAAATTATGGAAGATTTTTCAAGTGTTGCAGAAGATTTAGGTTTCCAAGTTAATCTGAAGCATAAGAAAATAAATATTTCAAATTCTCGAGTAGCTTGGGAGCATGAACAGTTTTCAAGGCTGAGAGTTACTGCTGCCACCCTCTCTGAACTCTCTACAGCACCTGAATTGCTAGAAAGCACCGGTGGTTTGATTGATGGAAGGCAATTTGTCAATGAAGCGGCAATTGTGAGAAGTGTGAAATTAATTGCCGAGTCTCTTGCGAAGCATATTTATGGGCATCAAGGAAAGAATGTACAGATCTTTGCCGACAACAGTAACTTGGCTGTAAATCCTTCTTATGTTCGATCATGGTTAGATATTTTGTCGCGAACACCTCGAGTAGCACCATTTTTATCAAAAGACGATCCTTTTATTACGGCATTGAAAAAGGAATTAGAAGATCATACTGATGAAGTTCATCTGCAACGAGAAGTACTAGATGGGATGTTCACTTTCTATGATTCAACTACAGCAAAGCTGAACATATATCAGGTTGCCAGTGTCACGTTTGACTTGCTGTTGCTTCTAGTGTTGGGATCATATTTAATTGTGCTCTTCAGTTTCTTGGTCATCACTACTAGGGGACTTGATGATCTAATCAGTTTATTTCGGCGGCCTCCTTCTCGAAAAGTGAAGACTGCATAA 1695 0.4177 MAMAPRKPRNREILFDSVIALVFILVACVDLCDGATVVDVYRLIQYDMSGVPFGSRLSSLNHHAASLHFSPNADLSRTVLLIPLRELNMSFVQEYIVASKPLGGLIFLLPRMFSFENKGGVGSNHDDGNKDPLKNVLAKLEQILIHTNLPYPVYFAFEDDNIDNVLLDIKKNDASGQPATATTGGYKFVISATEPKKVGSPPITNIQGWLAGLKTDGDSHQLPTIAIVASYDTFGAAPALSVGSDSNGSGIVALLEVARLFSLLYSNPKTRGQYNLLFGLTSGGPYNYNGTRKWLQSFDQRLRESIDYAICLDSIGSWENELWIHVSKPPENAFIKQIMEDFSSVAEDLGFQVNLKHKKINISNSRVAWEHEQFSRLRVTAATLSELSTAPELLESTGGLIDGRQFVNEAAIVRSVKLIAESLAKHIYGHQGKNVQIFADNSNLAVNPSYVRSWLDILSRTPRVAPFLSKDDPFITALKKELEDHTDEVHLQREVLDGMFTFYDSTTAKLNIYQVASVTFDLLLLLVLGSYLIVLFSFLVITTRGLDDLISLFRRPPSRKVKTA 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01415 564 Gene3D Zn peptidases 151 416 - -
Trre7g01415 564 CDD M28_nicalin_like 137 430 - -
Trre7g01415 564 PANTHER NICALIN 13 564 IPR016574 GO:0009966|GO:0016020
Trre7g01415 564 Pfam Nicastrin 225 361 - -
Trre7g01415 564 PIRSF Nicalin 4 559 IPR016574 GO:0009966|GO:0016020
Trre7g01415 564 ProSitePatterns EF-hand calcium-binding domain. 245 257 IPR018247 -
Trre7g01415 564 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 28 - -
Trre7g01415 564 SUPERFAMILY Zn-dependent exopeptidases 149 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01415 Trre-Chr7 10420764 10427925 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01415 7 562 EF-hand Containing Proteins AT3G44330 74.955 0.0 854
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01415 K26499 - gmx:100779713 1014.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g01415 7 10420764 10427925 Trre7g01415 7 10420764 10427925 ECH