Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01408 ATGTCACTTGTAACAACCACCACTCCAACAACCATCAACGACGGACCAATCATCGCCGAGGTCGACATGGGTTCCGATTTCAATGCACTCACTGTTCGAGCCACTGTTATTCAAGCTTCCACCATCTTCTACGACACTCCCGCCACTTTAGATAAGGCTGAGAGATTGCTGGCGGAAGCTGCTAGCTATGGTTCTCAGCTTGTTGTATTTCCAGAAGCATTTATTGGTGGCTATCCGCGTGGTTCTGGTTTTGGTGTTTCCATTGGTAACCGCACTGCCAAGGGTAGAGAAGATTTCAGAAAGTATCATTCAGCTGCCATTGATGTGCCTGGTCCTGAGGTGGATAGATTGGCAGCAATGGCGGGGAAGTATAAAGTACATTTAGTGATGGGTGTAATAGAGAGGGATGGCTACACACTTTATTGTACCGTTCTCTTCTTTGATTCTCAAGGTCATTACCTAGGAAAGCACAGGAAAATCATGCCAACGGCTCTAGAGCGTGTTATCTGGGGTTTTGGGGATGGATCAACCATTCCTGTGTTTGAAACTCAAATTGGAAAAATAGGCGCTGCTATTTGTTGGGAGAACAAGATGCCACTATTAAGGACAGCCATGTATGCTAAAGGTGTGGAAATATATTGTGCACCGACTGCTGATTCCAGGGAACTGTGGCAAGCATCAATGGCCCATATTGCACATGAAGGTGGTTGTTTTGTTTTGTCTTCAAATCAATTCTGTAGGAGAAAGGATTATCCACCTGCTCCAGAGTATGTTTTTGAAGGTTCAGAAGAGGACCTTACACCTGATTCTGTTGTATGTGCTGGGGGTAGTGTCATTATGTCACCATCGGGGGCTGTTTTGGCTGGACCAAATTACGAGGGAGAGGCGCTGATAACAGCAGACCTAGATCTCGGTGAAATAGCAAGAGCAAAGTTCGATTTTGATGTGGTTGGACACTATGCAAGACCTGAAGTGCTCAGCTTGATTGTCAAGGACCATCCAACAATTCCGGTGACTTTTACCTCGGCGTCAACAGAAACTGAAGAGAAGACCAAGTAG 1059 0.458 MSLVTTTTPTTINDGPIIAEVDMGSDFNALTVRATVIQASTIFYDTPATLDKAERLLAEAASYGSQLVVFPEAFIGGYPRGSGFGVSIGNRTAKGREDFRKYHSAAIDVPGPEVDRLAAMAGKYKVHLVMGVIERDGYTLYCTVLFFDSQGHYLGKHRKIMPTALERVIWGFGDGSTIPVFETQIGKIGAAICWENKMPLLRTAMYAKGVEIYCAPTADSRELWQASMAHIAHEGGCFVLSSNQFCRRKDYPPAPEYVFEGSEEDLTPDSVVCAGGSVIMSPSGAVLAGPNYEGEALITADLDLGEIARAKFDFDVVGHYARPEVLSLIVKDHPTIPVTFTSASTETEEKTK 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01408 352 Pfam Carbon-nitrogen hydrolase 33 311 IPR003010 GO:0006807
Trre7g01408 352 ProSitePatterns Nitrilases / cyanide hydratase signature 1. 64 79 IPR000132 GO:0003824
Trre7g01408 352 FunFam Bifunctional nitrilase/nitrile hydratase NIT4B 22 316 - -
Trre7g01408 352 SUPERFAMILY Carbon-nitrogen hydrolase 31 331 IPR036526 -
Trre7g01408 352 CDD nitrilases_CHs 32 330 IPR044149 GO:0003824
Trre7g01408 352 ProSitePatterns Nitrilases / cyanide hydratase active site signature. 189 202 IPR000132 GO:0003824
Trre7g01408 352 Gene3D - 26 316 IPR036526 -
Trre7g01408 352 PANTHER NITRILASE 16 347 IPR044149 GO:0003824
Trre7g01408 352 ProSiteProfiles Carbon-nitrogen hydrolase domain profile. 32 304 IPR003010 GO:0006807
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01408 Trre-Chr7 10376702 10380129 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01408 K13035 - gmx:100778110 639.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g01408 7 10376702 10380129 Trre7g01408 7 10376702 10380129 ECH