Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01399 ATGGGTGTGCCATCGTTTTATAAATGGTTAATAGAAAAATATTCAAAGGCAGTTCAAGACACAAATACTTCAACTGTCGAATATGATAATCTTTATCTTGACATGAATTCCATTATCCACCCATGTTTTCATCCCAATGATGATGGAAATAGCAACAGTTCTCCTCCAACAACTTTTGATCAAGTGTTTACAAATATGTTTGACTACATTGATCACCTTGTTACCATTGTTAAGCCTCGCAAGCTACTCTACATGGCCATTGACGGAGTAGCTCCACGCGCAAAAATGAACCAGCAAAGGACTAGACGTTTTCGAACGGCTAAAGACGATGAAATGCGTGAAGCTGAGGAAGAGAGACTGAGGAAGCAATTTGAAATGGAAGGAAAACAGGTTCTTCCTAAACAAGAATGTGAAGTGTCAGATTCAAATATAATAACACCAGGAACAGAATTCATGCACCAACTCTCAGAGGCTCTTAAGAGTTATATCTCTTCAAGAATATCCTCTGATTCATTATGGAAAGATATTATGGTAATTTTATCTGATGCTAATGTTCCTGGAGAAGGAGAGCATAAGATTATGTCCTTCATAAGGAAACAACGAGGTCTTCTTGATTACGATCCAAACACCGTTCACTGCTTATATGGCTCGGATGCTGATCTTATAATGCTTGGACTGTCAAGCCATGAGCCTCATTTTTCGATCATAAGAGAGTATGTGCCTAAATATCATGAGAAGCCGCAACAGAATGGTGTTAAGCGGTTCGAGCTTTTGCATATTTGGTTGTTAAGGGAATATCTTGAATTAGAAATGACTATAGAAGATCCTCCGAAAAATTTCATTGTTGATTTTGAGCGAATAGTTGATGATTTTATCTTCATTTGTTTCTTTGCTGGAAATGATTTTCTTCCCCATTTGCCATCTTTGGATATTTATGAGGGGGCTATTGATTTGCTTATGACTGTTTACAAGAAAGAGTTCAGTAAATTTGGAGGATATCTTGTGGACATAAATAAGATAGGGGAGAAACATAATGCATATGTGAAGCTATCAAGAGTTGAAAAATTCATACTTATGGTTGGTGCATATGAAGAAAAAATCTTCAATAAAAGGAGTGCAATTAGAGGCAAGAAATTGAGAAGGATTATTAATGATCAAGAGCAATCAAAGCAAGAAGAGCAGAATGCATTTGATATTACGGATATTGAAAACGAAAGTAGTTCAAATTGCGCCATTCGCATTAAAAAGGATCATGCTATCAACAATGCTTGCCTTGTTTCTGATGAAGAAATTTTGAAAAACACAAAGGATTTAAAAGCGGAATTAAAAACATGCTTAAAAGACAAAGGAGACTTATTGAAGAGTGGAGATTTCTTGATTGACAAGATAAAATTTGGAACTGTTGGGTTTAAAGAGAGGTATTACAAAGAGAAGTTTTCTGTGGACGGTTCTACCAACATTGAGCTAAAAAGGAAAGAAATAGTGCAGAAGTACACTGAGGGTTTGTTGTGGGTTCTACAATATTACTTTTCAGGAGTTGCTTCATGGACATGGTTTTATCCCTATCACTATGGTCCATTTGCTTCAGACTTAAAAGGCATGGGTCAAGTGAGAGTAAATTTTGAGAAAGGTGTTCCATTTTTACCTTTTGATCAACTCTTAAGTGTTCTCCCTCAAAGAAGTTCTTATGCACTTCCAAAAGCTTATGCACAGTTGATGCTGGATGAGGAGTCTAAGATATTTGACTTGTTTCCTCAAAATTTTGAAGTTGACATCGAAGGAAAGCGCTTCATGTGGCAGGGTATATGCAAACTTCCGTATATGGATGAAAAAAGGCTATTGGCTGAAACCAGAGAACTCATGGAAGGATTAACTGAAACTGAAGCTAAAAGAAATTCGGTTGAAGTAGATAGGTTGTTGGTTAGTAACACTGTCAAGGTAGCAGAAAAAATTTGCTCGCTAAGTTCAAACAAATTAGATACAAGCATAAGTGATGGCATTGGCGGCATCATAAGTCTTTGTCACGAGTGCGTTGAGAAAAACCAACAAGAAGAAGTCTTCTGTGTTAAATATGAGATGCCTATGAATGGTTCGAGTCATATTCAGCATCTACTATATGGTGTAAATTTCCCCGAAAAGACAATCTTTGAAAATGACATAGAGGAAACAGTTCTCTGGCATGAACGTCAACAACATCATAACCGTTTCGAGAGGTCGCATAATCAAGACAATTGGAGAAGTTCAAATAGAGAAGGCAATAATTCAAAGTTTCCTCCGAATGCATCGACTTTTGGTGTAAGAAGAAACAATGCACCTCCTGAAACGATTCACAAAGGTGCTGGCGTTGGATGGGGTACAGGTAGAGGCAAACCAGAAAGGCTTGATCATCACATTCTGAATGAAAGAATGTCGACATTTACTCCTTTTCGTAAACAACCTAATGATTACGGGGGATCTTCTTATCAACAACGATCGAATGCGTCTTTTGGTAGAGGACGAGGCAGGGCTCAACAGAATTCGAACAATGTGTATTCATGGAAGAGTGTTTCTTCTAATTCAAACAACTCGTTACGTCCTCAATGGACTGAATCAAAGGATAAAAGCCGCTGGTAG 2613 0.375 MGVPSFYKWLIEKYSKAVQDTNTSTVEYDNLYLDMNSIIHPCFHPNDDGNSNSSPPTTFDQVFTNMFDYIDHLVTIVKPRKLLYMAIDGVAPRAKMNQQRTRRFRTAKDDEMREAEEERLRKQFEMEGKQVLPKQECEVSDSNIITPGTEFMHQLSEALKSYISSRISSDSLWKDIMVILSDANVPGEGEHKIMSFIRKQRGLLDYDPNTVHCLYGSDADLIMLGLSSHEPHFSIIREYVPKYHEKPQQNGVKRFELLHIWLLREYLELEMTIEDPPKNFIVDFERIVDDFIFICFFAGNDFLPHLPSLDIYEGAIDLLMTVYKKEFSKFGGYLVDINKIGEKHNAYVKLSRVEKFILMVGAYEEKIFNKRSAIRGKKLRRIINDQEQSKQEEQNAFDITDIENESSSNCAIRIKKDHAINNACLVSDEEILKNTKDLKAELKTCLKDKGDLLKSGDFLIDKIKFGTVGFKERYYKEKFSVDGSTNIELKRKEIVQKYTEGLLWVLQYYFSGVASWTWFYPYHYGPFASDLKGMGQVRVNFEKGVPFLPFDQLLSVLPQRSSYALPKAYAQLMLDEESKIFDLFPQNFEVDIEGKRFMWQGICKLPYMDEKRLLAETRELMEGLTETEAKRNSVEVDRLLVSNTVKVAEKICSLSSNKLDTSISDGIGGIISLCHECVEKNQQEEVFCVKYEMPMNGSSHIQHLLYGVNFPEKTIFENDIEETVLWHERQQHHNRFERSHNQDNWRSSNREGNNSKFPPNASTFGVRRNNAPPETIHKGAGVGWGTGRGKPERLDHHILNERMSTFTPFRKQPNDYGGSSYQQRSNASFGRGRGRAQQNSNNVYSWKSVSSNSNNSLRPQWTESKDKSRW 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01399 870 Gene3D - 536 634 - -
Trre7g01399 870 MobiDBLite consensus disorder prediction 733 870 - -
Trre7g01399 870 PANTHER 5'->3' EXORIBONUCLEASE 1 838 IPR027073 -
Trre7g01399 870 CDD PIN_XRN1-2-like 31 267 - -
Trre7g01399 870 MobiDBLite consensus disorder prediction 746 769 - -
Trre7g01399 870 MobiDBLite consensus disorder prediction 805 861 - -
Trre7g01399 870 Pfam XRN 5'-3' exonuclease N-terminus 1 238 IPR004859 GO:0003676|GO:0004527
Trre7g01399 870 Pfam Xrn1 helical domain 282 720 IPR041412 -
Trre7g01399 870 PIRSF Exonuclease_Xrn2 1 24 IPR017151 GO:0004534|GO:0005634|GO:0006139
Trre7g01399 870 PIRSF Exonuclease_Xrn2 18 252 IPR017151 GO:0004534|GO:0005634|GO:0006139
Trre7g01399 870 PIRSF Exonuclease_Xrn2 241 869 IPR017151 GO:0004534|GO:0005634|GO:0006139
Trre7g01399 870 Gene3D - 128 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01399 Trre-Chr7 10304209 10309433 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01399 - - tpra:123924370 1508.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g01399 7 10304209 10309433 Trre7g01399 7 10304209 10309433 ECH