Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01394 ATGAACACGGAGCACCCTTCTACTAGAAGTATGCCATCAAGAAGTTCTTTTGATACCGGCTTTATCCGGCGTCTAACCTTGACAGTGGTGTCTGTCTTTGTCATTTTAACGGCTGTTATTGGTATAGCTTGGTTTGTTATGCATCCACACGACCCTAGTTTTGCGGTAACATCACTTTCTGTCTCGAACTTCACTGTATCTGATTCACAGATTACAGGCATGTATGAGGTTAGACTGACCGTAACAAATCCAAACAAGAAAATCCAATTGATTCTCGACGATTTCAACGTGGTAATACTTTACAGTGAGGTCGTGCTCTCGATAGCTGAGGTGCAACAACCTATACTTTTGGTGAAGATGAGCAATATGAGTGTGAATGTTGACTTGGTAATGAAGAGTTCAGTAAAGTTGGTGCAAGAGAATCTAGTTAAGGAGTGGAATAAAGGGGTTGTGAATTTTGATGTGAAGATGGTTTTTAGACTTAGATTTGAGGCTGGAATATGGCCAAGCAAGGAAAAAATATTGTGTGTTTATTGTGACGATTTGGATGTGAAATTCTATTCTCCAACTACAGGGGTGTCCAAAAAATAA 591 0.3976 MNTEHPSTRSMPSRSSFDTGFIRRLTLTVVSVFVILTAVIGIAWFVMHPHDPSFAVTSLSVSNFTVSDSQITGMYEVRLTVTNPNKKIQLILDDFNVVILYSEVVLSIAEVQQPILLVKMSNMSVNVDLVMKSSVKLVQENLVKEWNKGVVNFDVKMVFRLRFEAGIWPSKEKILCVYCDDLDVKFYSPTTGVSKK 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01394 196 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 9 184 - -
Trre7g01394 196 Pfam Late embryogenesis abundant protein 78 168 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01394 Trre-Chr7 10288113 10288703 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01394 13 166 EF-hand Containing Proteins AT5G21130 25.904 4.99e-08 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01394 - - adu:107477673 194.512