Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01390 ATGGTGGAAAAGAAAGTTGTGATTATTGGAGGTGGTGCTGCTGGTGCTGTTCTTGCTAAAACTATACAACATCATGCAACTGTCACACTTATTGATCCGAAGGAGTATTTTGAGATTCCATGGGCAAGTTTGAGGGCAATGGTGGAACCATCTTTTGCAGAAAGGACAGTGATCAACCATAGAGAGTATTTCACAAAAGGTGACCTTATTGTATCAACTGCCATCAACATAACTGAATCTGAAGTCTTCACTGCCGATGGCCGTCATATTGCCTATGATTATCTTGTTATTGCCACCGGTCACACAGATCCTATCCCGAAAACAAGGACCGAAAGACTTGACCAATACAAAGGAGAAAATACAAAGATAAAATCTGCACGTTCAATTCTAATTGTCGGAGGAGGACCAACTGGTGTCGAGCTAGCAGCCGAGATAGCTGTTGATTTTCCTGACAAAAAAGTGACCATAGTACACAAAGGATCAAGATTGCTAGAATATATCGGACCGAAAGCTTCAAGAAAGACATTAAAATGGCTTAAATCAAGGAAAGTTGATGTGAAGCTAGATCAATCAGTTGACTTAGACTCATTCACAAATGAGACTTATCAAACTTCAGCTGGAGAGAGTATAGAAGCAGATGCACATTTTGTATGTATAGGTAAACCACTTGCTTCAACATGGCTAGGAGAAACTTTTTTGAAAGATGATTTGGATGGTAATGGAAGAGTTCAAGTTGATGAATACTTGAGAGTTAAGGGTAGGAGCAATGTTTTCGCAATTGGAGATATTACAGATATTCAAGAAATAAAACAAGGAGTGTATGCACAAGGCCATGCTAAATTAGTAGCGAAGAATCTAAAGCTATTGATCGAAGGAGCGGAGAAAGAACGTAAATTGGGAACTTACAAGGCACAAGCACCGATATCTATTGTTTCGCTCGGAAGAAAACATGGAGTTGCACAGTTCCCTTTCATGACAGTTATTGGAAGGTTTCCTGGTATTATCAAATCAGGAGATTTGTTTGTTGGAAAAACAAGAAAAGAATTAGGACTTGAAGCTAATGCTAAAAAATCTTAA 1077 0.3881 MVEKKVVIIGGGAAGAVLAKTIQHHATVTLIDPKEYFEIPWASLRAMVEPSFAERTVINHREYFTKGDLIVSTAINITESEVFTADGRHIAYDYLVIATGHTDPIPKTRTERLDQYKGENTKIKSARSILIVGGGPTGVELAAEIAVDFPDKKVTIVHKGSRLLEYIGPKASRKTLKWLKSRKVDVKLDQSVDLDSFTNETYQTSAGESIEADAHFVCIGKPLASTWLGETFLKDDLDGNGRVQVDEYLRVKGRSNVFAIGDITDIQEIKQGVYAQGHAKLVAKNLKLLIEGAEKERKLGTYKAQAPISIVSLGRKHGVAQFPFMTVIGRFPGIIKSGDLFVGKTRKELGLEANAKKS 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01390 358 ProSitePatterns EF-hand calcium-binding domain. 236 248 IPR018247 -
Trre7g01390 358 Gene3D - 1 344 - -
Trre7g01390 358 FunFam apoptosis-inducing factor 2 2 349 - -
Trre7g01390 358 PANTHER APOPTOSIS-INDUCING FACTOR 1 3 351 - -
Trre7g01390 358 Pfam Pyridine nucleotide-disulphide oxidoreductase 4 278 IPR023753 GO:0016491
Trre7g01390 358 PRINTS FAD-dependent pyridine nucleotide reductase signature 128 146 - -
Trre7g01390 358 PRINTS FAD-dependent pyridine nucleotide reductase signature 6 25 - -
Trre7g01390 358 PRINTS FAD-dependent pyridine nucleotide reductase signature 242 264 - -
Trre7g01390 358 PRINTS FAD-dependent pyridine nucleotide reductase signature 212 228 - -
Trre7g01390 358 SUPERFAMILY FAD/NAD(P)-binding domain 1 286 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01390 Trre-Chr7 10256823 10259457 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01390 K22745 - gmx:100817682 564.688