Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01373 ATGGGGAAGAATCAAAAGACAGAGCTAGGAAGAGCCCTTGTGAAGCAACACAACCAAATGATTCAACAAACAAAGGAGAAAGGTAGAATCTACAAGAAGAAGTTTCTCGAATCATTCACCGAAGTTTCTGATATTGATGCTATAATCGAACAAGCTGATGAAGATCATGAACAACAAGAACTCCTTGATCTTCCTCTTCCTCCTCCCACTTCCCGTATTAATCTGGATGTTGAGTCTGGTAGTGGTTTTAATGGTTTGACGGCTGAAGAAATTAAAAAGGAGCAGAAGATTGAAGAGGCGTTGCATGCTAGCAGTCTGAGAGTACCACGCAGGCCATCATGGAATGCTGAAATGTCTGCTGACGAGCTTCATGCCAATGAAACACAGCATTTCTTAACTTGGCGTCGTAGCCTAGCCAGACTTGAGGAAAATAAGAAGCTCGTCCTTACTCCATTTGAGAAAAATCTTGATATCTGGAGACAACTCTGGCGGGTTGTTGAGCGCAGTGATTTGCTTGTTATGGTTGTTGATTCACGAGATCCACTGTTCTATCGCTGTCCTGATCTTGAGGCTTATGCAAAGGAGGTTGATGTGCATAAACGCACATTGCTTTTGGTCAATAAGGCAGATCTTTTACCCGCTTCTGTCAGGGAGAAATGGGCAGAATACTTTCGTGCTCATGATATTCTCTTTATCTTCTGGTCAGCTAAAGCTGCTACTGCAGTTTTGGAAGGCAAAAAGCTCGGTTCATCACAGGCTGATAACATGGCGAGCGCTAATAACCCAGACACGAAGATCTATGGAAGGGATGAGCTCTTAGCCCGTCTACAATCAGAGGCAGAAGCTATAGTTGACATGAGGAGAAATTCTGACTCCTCGAGTGAAAATGCTTCTGTTAGTTCATCATTGAGTCATGTAGTTGTAGGATTTGTTGGATATCCTAATGTAGGGAAAAGTTCAACAATCAATGCACTGGTTGGCCAAAAAAAAACTGGTGTCACCTCTACCCCAGGAAAAACAAAGCACTTTCAGACATTAATTATTTCGGAAAGGCTAACCCTTTGTGATTGTCCCGGATTAGTTTTTCCATCTTTTTCAAGCTCAAGATATGAGATGATTACTTGTGGGGTGTTGCCAATTGATAGGATGACCGAACACAGGGAGTGTGTCCAAGTTGTCGCCAATAGAGTCCCTAGGCATGTCATAGAAGAGGTCTATAAGATCAGTCTTCCTAAGCCTAAGTCATATGAGTCCCAAACCCGACCCCCTCTAGCATCTGAACTTTTGAGAACATATTGTGCTTCTCGTGGACAATCTACTTCTAGTGGACTGCCTGATGAAACCAGAGCTTCTCGTCAGATGCTGAAAGATTACATTGACGGGAAGCTGCCTCACTATGCGATGCCCCCTGACGTGTCGGATGTGGAATTATCATCAGAAGATCCCAATGGAAACAGCCAAGTTAATTTGAATGTGTCAGATTCATCTGATATTGAAGATTCTTCAGTTGCTGAGACTGAACCTGCACCAAAACTTGAACACGTATTGGACGACCTTAGTTCATTTGACATTGCTAATGGACTTGCTTCAAACAAAGCTGCGGCCAAGAAGTCCAAGGAATCTCATAAGCACCACAAAAAGCCGCAGAGGACAAAAGATCGTTCATGGAGAGCAGGGAAAGCAGTGAAAGATGATAGCGATGGGATGCCAATTGCAAGATTTCATCAGAAACCAATAAATGCAGGTCCTCTGAAGGTTTGA 1761 0.4327 MGKNQKTELGRALVKQHNQMIQQTKEKGRIYKKKFLESFTEVSDIDAIIEQADEDHEQQELLDLPLPPPTSRINLDVESGSGFNGLTAEEIKKEQKIEEALHASSLRVPRRPSWNAEMSADELHANETQHFLTWRRSLARLEENKKLVLTPFEKNLDIWRQLWRVVERSDLLVMVVDSRDPLFYRCPDLEAYAKEVDVHKRTLLLVNKADLLPASVREKWAEYFRAHDILFIFWSAKAATAVLEGKKLGSSQADNMASANNPDTKIYGRDELLARLQSEAEAIVDMRRNSDSSSENASVSSSLSHVVVGFVGYPNVGKSSTINALVGQKKTGVTSTPGKTKHFQTLIISERLTLCDCPGLVFPSFSSSRYEMITCGVLPIDRMTEHRECVQVVANRVPRHVIEEVYKISLPKPKSYESQTRPPLASELLRTYCASRGQSTSSGLPDETRASRQMLKDYIDGKLPHYAMPPDVSDVELSSEDPNGNSQVNLNVSDSSDIEDSSVAETEPAPKLEHVLDDLSSFDIANGLASNKAAAKKSKESHKHHKKPQRTKDRSWRAGKAVKDDSDGMPIARFHQKPINAGPLKV 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01373 586 Pfam 50S ribosome-binding GTPase 308 366 IPR006073 GO:0005525
Trre7g01373 586 FunFam Large subunit GTPase 1 158 364 - -
Trre7g01373 586 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 157 416 IPR027417 -
Trre7g01373 586 MobiDBLite consensus disorder prediction 531 586 - -
Trre7g01373 586 Gene3D - 158 364 IPR027417 -
Trre7g01373 586 CDD HSR1_MMR1 158 363 - -
Trre7g01373 586 PRINTS GTP1/OBG GTP-binding protein family signature 354 369 IPR006073 GO:0005525
Trre7g01373 586 PRINTS GTP1/OBG GTP-binding protein family signature 308 328 IPR006073 GO:0005525
Trre7g01373 586 FunFam Large subunit GTPase 1 368 469 - -
Trre7g01373 586 PANTHER LARGE SUBUNIT GTPASE 1 HOMOLOG-RELATED 1 557 IPR043358 GO:0003924
Trre7g01373 586 Coils Coil 269 289 - -
Trre7g01373 586 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 159 363 IPR030378 GO:0005525
Trre7g01373 586 MobiDBLite consensus disorder prediction 554 571 - -
Trre7g01373 586 MobiDBLite consensus disorder prediction 478 499 - -
Trre7g01373 586 MobiDBLite consensus disorder prediction 537 553 - -
Trre7g01373 586 MobiDBLite consensus disorder prediction 462 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01373 Trre-Chr7 10003386 10007568 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01373 K14539 - gmx:100817523 835.484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g01373 7 10003386 10007568 Trre7g01373 7 10003386 10007568 ECH