Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01368 ATGGATTTTCATTCTCATCCCAATTTCTTCCTTCTTCTCTCCTTCTCCGTTCTCTTCCTTTCATTTTTACACGTTCAAGCTAAAGTTACTTTCAAATATTGCGATAAGAAAGCAAACTATCCTGTTAAGGTGTCTGGGATTGAAATATCGCCAAATCCCGTCGTCAGTGGTGATCCAGCCAACTTTAAGATCTCAGCTACTTCTGGTAAAGCACTTCATGGTGGAGATGTGGTAATTGGAGTTTCCTATGTTGGGGTGCGTGTCCATTCTGAAACCATTGATCTGTGCAAGGAAGTATCTTGTCCTGTTGCTAATGGAAATTTTGTGATTTCTCACACCCAAACACTGCCTTCAATTACTCCACCGGGACCTTATACTCTGGAGATGAAACTGAAGGACGACAACGGCGACCTGTTAACTTGCATCAAGTTTAATTTTAAAATCGTTCTCTGGTCCCTTGTGTCCGACATGTGA 474 0.4177 MDFHSHPNFFLLLSFSVLFLSFLHVQAKVTFKYCDKKANYPVKVSGIEISPNPVVSGDPANFKISATSGKALHGGDVVIGVSYVGVRVHSETIDLCKEVSCPVANGNFVISHTQTLPSITPPGPYTLEMKLKDDNGDLLTCIKFNFKIVLWSLVSDM 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01368 157 FunFam putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0282179 29 150 - -
Trre7g01368 157 SUPERFAMILY E set domains 28 149 IPR014756 -
Trre7g01368 157 PANTHER NIEMANN PICK TYPE C2 PROTEIN NPC2-RELATED 10 149 IPR039670 GO:0015918|GO:0032934
Trre7g01368 157 Gene3D - 27 151 - -
Trre7g01368 157 SMART pgtp_13 31 146 IPR003172 -
Trre7g01368 157 Pfam ML domain 29 148 IPR003172 -
Trre7g01368 157 CDD PG-PI_TP 31 146 IPR033917 GO:0032366
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01368 Trre-Chr7 9959381 9961883 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01368 - - pvu:PHAVU_011G100100g 219.935