Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01342 ATGAGTGACAGTGAAAAACAACCACAACAACAAAATATAGTGCTCCCAAAAGATCATCAAAATCTTCCAATCACAAAAAATCAATCAAATTTCAACTCTAAAATCAAAAACCAATCTTCATTATCTATCATCCTAACAAAAATTCATGCAGGATATTTTAGAATAAGTCTATCTCTCTCAATCCAAGCTTTATTATGGAAAATCCTAATAGAACCAATCAAAGATGCACATGTTCTTAGACATGTATTTACAATGATACCCTCAACAGCTTTAATTCTATTATGGACACTATCCTTATTAACACTCTTAACACTTTCTTTTCTCTATCTTCTAAAATGTTTACTTCATTTTGATAAAGTTAAAGAAGAATTCTTTAACCAAATTGGTGTAAACTACATGTTTGCTCCATGGATTTCTTGGCTAATTTTATTAGAATCATCACCAATTGTTCCACCTGCAGCACTTCATTACAAAATCTTTTGGTTGTTTTTTGTGATTCCTGTGGTTATTCTTGATGTGAAAATTTATGGTCAGTGGTTTACTAAAGGGAAGATGTTTTTGTCGATGGTCGCGAATCCGACGAGTCAAATGTCTGTTATTGGTAATTTGGTTGCTGCACAAGCTGCTGCAATAATGGGATGGAAAGAGAGTGCACTTTGTTTGTTTTCTCTTGGTATTGCACATTATTTGGTGCTTTTTGTTACACTTTATCAGAGGTTACCGGGGAATAATAAGATTCCGGCGATGTTGCGACCGGTGTTTTTCTTGTTCTTTGCTGCTCCTAGTATGGCTAGTTTGGCTTGGCACTCTATTTGTGGTTACTTTGATACTGCTTCAAAGATGTTGTTCTTTCTCTCCCTCTTCCTTTTCTTGTCCTTGGTTTCAAGGCCTTTGCTATTCAAGAAGTCTATGAAGAAATTCAGTGTGGCATGGTGGGCTTATTCTTTTCCTCTGACTGCTTTGGCAATAGCTTCAGCACAATATGCACATGAAGTTAAGGGAATCATGGCTCATGTTATTATGTTTATCTTATCATTAATCTCAGTTTTGGTTTGTATCATGTTAATGATTGTCTCTGCTCTCAACATTAGGATGCCATTAACTGCTCGAAACCTTGATTCAAAACAAGAAGTAACATTGGAGAAACTTGATCAACAATATAATTAG 1167 0.3496 MSDSEKQPQQQNIVLPKDHQNLPITKNQSNFNSKIKNQSSLSIILTKIHAGYFRISLSLSIQALLWKILIEPIKDAHVLRHVFTMIPSTALILLWTLSLLTLLTLSFLYLLKCLLHFDKVKEEFFNQIGVNYMFAPWISWLILLESSPIVPPAALHYKIFWLFFVIPVVILDVKIYGQWFTKGKMFLSMVANPTSQMSVIGNLVAAQAAAIMGWKESALCLFSLGIAHYLVLFVTLYQRLPGNNKIPAMLRPVFFLFFAAPSMASLAWHSICGYFDTASKMLFFLSLFLFLSLVSRPLLFKKSMKKFSVAWWAYSFPLTALAIASAQYAHEVKGIMAHVIMFILSLISVLVCIMLMIVSALNIRMPLTARNLDSKQEVTLEKLDQQYN 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01342 388 PANTHER S-TYPE ANION CHANNEL SLAH3 35 365 IPR030183 GO:0006873|GO:0008308|GO:0016020
Trre7g01342 388 Gene3D - 43 365 IPR038665 -
Trre7g01342 388 Pfam Voltage-dependent anion channel 48 357 IPR004695 GO:0016020|GO:0055085
Trre7g01342 388 CDD TDT_SLAC1_like 49 357 - -
Trre7g01342 388 FunFam S-type anion channel SLAH1 42 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01342 Trre-Chr7 9747119 9749949 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01342 K26672 - gmx:100794114 483.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g01342 7 9747119 9749949 Trre7g01342 7 9747119 9749949 ECH