Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01318 ATGTCTTGGCTTCTCAGATCAACCAAATCTAAACTCTTATCTTCCACTTCTTCTCTTTCTAGAACCTTCTCCTCAATCCCTCGTTCCACTAATCAGATCGGAGCCATCTCTCCCGCCTCCGCCGAACTCTTCCACCGCACCACCACCACTCTTCCCACCGCGGATGAAAACCCTACCAAGGGGAACGTGATTGGTTTCCCCAAGAATTTGGAGAATAAGCTTGGTGGTGATTCTAATGTGATCAATTCTTTGAGATACCATGCTCTTGGACTGGACACTAATGTGATGGCTGGAGTTAGATATGGTACTAACGTCTGTGCTACCAAGAGTCCAATGCTATTGGGAGTCAATGCTCTGATGGCAAGGAACTTTGTGAGAGGCGTGAGTGCTGATGCATTGGGATCGGCTGGTCATAGACGTTCTATGAGTGACATCCCAAGTAAAGCCAGTGAGACGTCTAGTTTTCGCCCATTATCGCCTCATCTTCCTGTTTATCAGCCCCAGCTTTCTTCGACACTTTCAATTTGCAATAGAATTGCTGGAGCTTTCCTATCTGCTGTTGTCTTGCTTTTTTATATCATATACATGAAAATTGGCATGGTTAGTCTCACGTTTGAGTCATTCTACCAGTTCGTATTCTATTCATCAAAACTCCACTTACTTGCCGTTGAGATTTCTGCCTTAGCCATGTCCTATCATCTGTATAGTGCAATTCGTCATTTATTCATATGA 732 0.4426 MSWLLRSTKSKLLSSTSSLSRTFSSIPRSTNQIGAISPASAELFHRTTTTLPTADENPTKGNVIGFPKNLENKLGGDSNVINSLRYHALGLDTNVMAGVRYGTNVCATKSPMLLGVNALMARNFVRGVSADALGSAGHRRSMSDIPSKASETSSFRPLSPHLPVYQPQLSSTLSICNRIAGAFLSAVVLLFYIIYMKIGMVSLTFESFYQFVFYSSKLHLLAVEISALAMSYHLYSAIRHLFI 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01318 243 PANTHER SUCCINATE DEHYDROGENASE CYTOCHROME B560 SUBUNIT 137 242 IPR014314 GO:0000104|GO:0006099|GO:0009055|GO:0045281
Trre7g01318 243 CDD SQR_TypeC_SdhC 156 242 IPR014314 GO:0000104|GO:0006099|GO:0009055|GO:0045281
Trre7g01318 243 Pfam Succinate dehydrogenase/Fumarate reductase transmembrane subunit 155 243 IPR000701 GO:0016627
Trre7g01318 243 SUPERFAMILY Fumarate reductase respiratory complex transmembrane subunits 152 242 IPR034804 GO:0016020
Trre7g01318 243 Gene3D Fumarate reductase/succinate dehydrogenase, transmembrane subunit 143 243 IPR034804 GO:0016020
Trre7g01318 243 FunFam Succinate dehydrogenase subunit 3-1, mitochondrial 143 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01318 Trre-Chr7 9548107 9551564 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01318 K00236 - gmx:100527396 287.73