Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01313 ATGTCCCAACAATTTAGTAGAAAGAATGGTCACTCTTTCACGCGGCGGAGGATTAATAATCGCGTATCATTGCTCCGAAGATGCATACTCCGTGCTCTACATCGTTTCCTTGCCTGCTCCGGACAAAAGCCCGGTGCTAATTCTACGTACAGCAAGTTAACGCCGCATGCAGCATTGCCGTCTCCGCCTCCGCCTTTGGAATCCGAAACCGGATCTGCTCGGCCATCGGTGTTTCGCACAAATGAATTAGACGCTGATAATTTGGTTTCTCTCAAAATCAGCTTGTTGGGTGATTGCCAAATTGGAAAAACAAGCTTTTTGGTGAAATATGTAGGAAATGAAAAAGAGCAGCAACAGGGAGGAGAACAGAGGAAAGGGTTGAATCAAATGGACAAAACTTTGGTTGTGAGTGGAGCACGTATATCATATTGTATTTGGGAAGTACAAGGGGATGGAAAATCAGAAGACCAACTTCCAATGGCATGTAAGGATTCAGTTGCAATTTTGATCATGTTTGATCTAACTAGTAGATGCACATTAAATAGTGTTTTGGGATGGTACAAAGAAGCAAGGAAATGGAATCAGACTGCAATACCAGTTTTGATAGGAACAAAGTTTGATGATTTCATTCAGCTACCTATTGATATGCAATGGACCATCGCTAGTGAGGCAAGAACATATGCAAAAGCATTGAATGCCACTTTGTTCTTTTCAAGTGCAACATACAACATCAATGTGAACAAGATCTTCAAGTTCATCACTGCAAAACTCTTTGATTTACCATGGACAGTTGAAAGAAATCTAAATGTTGGTGAACCCATCATTGATTTCTAA 834 0.4101 MSQQFSRKNGHSFTRRRINNRVSLLRRCILRALHRFLACSGQKPGANSTYSKLTPHAALPSPPPPLESETGSARPSVFRTNELDADNLVSLKISLLGDCQIGKTSFLVKYVGNEKEQQQGGEQRKGLNQMDKTLVVSGARISYCIWEVQGDGKSEDQLPMACKDSVAILIMFDLTSRCTLNSVLGWYKEARKWNQTAIPVLIGTKFDDFIQLPIDMQWTIASEARTYAKALNATLFFSSATYNINVNKIFKFITAKLFDLPWTVERNLNVGEPIIDF 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01313 277 ProSiteProfiles small GTPase Rab1 family profile. 84 277 - -
Trre7g01313 277 Gene3D - 79 268 IPR027417 -
Trre7g01313 277 SMART rab_sub_5 91 260 - -
Trre7g01313 277 Pfam Ras family 92 257 IPR001806 GO:0003924|GO:0005525
Trre7g01313 277 PIRSF GTPase_Tem1 2 277 IPR017231 -
Trre7g01313 277 PRINTS Transforming protein P21 ras signature 195 208 - -
Trre7g01313 277 PRINTS Transforming protein P21 ras signature 91 112 - -
Trre7g01313 277 PRINTS Transforming protein P21 ras signature 235 257 - -
Trre7g01313 277 PRINTS Transforming protein P21 ras signature 134 156 - -
Trre7g01313 277 PANTHER - 89 267 - -
Trre7g01313 277 MobiDBLite consensus disorder prediction 48 74 - -
Trre7g01313 277 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 91 270 IPR027417 -
Trre7g01313 277 SMART rho_sub_3 93 259 IPR001806 GO:0003924|GO:0005525
Trre7g01313 277 FunFam Septum-promoting GTP-binding protein 1 81 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01313 Trre-Chr7 9510659 9513815 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01313 K07976 - gmx:100792211 407.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g01313 7 9510659 9513815 Trre7g01313 7 9510659 9513815 ECH