Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01280 ATGGATAGTTTACCTTCAAATGAAGATGACCCTTCTTCTCTTCCTCCACTTTGTGTCTCCGAAGACACTTCGCGGTTTCGGTACACTTGTAAAGGTGGACTTCGATCAGCTATACGTGTGGCGCGTGTAGTTGTGGAGACGGTTGCCTTGAATCATTCTGATGTGAAGTGGTATGTGTTTGGAGACGATGATACGGTTTTCTTTCCGGAGAATTTAGTTAAGACTCTTTCTAAATATGATCATGAGCTTTGGTATTATATTGGTGCACACTCTGAGATTTATGAGCAGAATCGGATTTTTGGTTTCGGAATGGCTTTTGGTGGTGCTGGTTTTGCTATAAGTTCTTCTTTGGCTAAAGTTTTGGCTAAGGTTTTTGATTCTTGTTTGGAAAGGTACCCTCATCTTTATGGAAGTGATGGAAGGGTTTACTCTTGCTTAGCAGAACTTGGTGTTGGATTGACACATGAACCAGGTTTTCATCAGGTTGATTTGACTGGAAACACCTTTGGCCTATTAGCATCACATCCAGTAACACCGTTATTATCTCTACATCATCCAGATTACACAGATCCAATTTTTCCAAACATGACAACAACAAAAGCCCTACAACATTTATTTGAAGCAGCAAATGTTGATTCTCAAAGGTTACTACAACAAACAATTTGCTATGACAAGTGGTTTTCATGGACAATTTCAGTTTCATGGGGTTATGCTGTTCAAGTATTTCCAAACCATATGTTTTTGCCTGATGTTGTTAATGTTCAAGAAACATTCAAGCAATGGAAAAAGGGAAATATGTTGGCAAAAGCATATAATTTTAATACAAAACCACTTCATTCTGATCCTTGTAAAAGATCTACTATCTTTTATTTTGATAGTGTTTCTTCTGGTAATGATGGCATCATAAGTAGCTATTATAAGAGATCTTTTCAGAATTGCTCAAAGAATTTGGTGTCTCCAAAGAAACTTGAAGTCATCAAAGTTGTTACTCATAAGCTAGACCTTGACATCAAACAGTTGCAGGCTCCAAGAAGGCACTGTTGTGATGTATTGCCTTCTAGTGCTGGTGACCAAATGGAAATTGCTGTTAGAGAATGCAAAGATGAAGAATTGATTTATATGCACTGA 1128 0.3768 MDSLPSNEDDPSSLPPLCVSEDTSRFRYTCKGGLRSAIRVARVVVETVALNHSDVKWYVFGDDDTVFFPENLVKTLSKYDHELWYYIGAHSEIYEQNRIFGFGMAFGGAGFAISSSLAKVLAKVFDSCLERYPHLYGSDGRVYSCLAELGVGLTHEPGFHQVDLTGNTFGLLASHPVTPLLSLHHPDYTDPIFPNMTTTKALQHLFEAANVDSQRLLQQTICYDKWFSWTISVSWGYAVQVFPNHMFLPDVVNVQETFKQWKKGNMLAKAYNFNTKPLHSDPCKRSTIFYFDSVSSGNDGIISSYYKRSFQNCSKNLVSPKKLEVIKVVTHKLDLDIKQLQAPRRHCCDVLPSSAGDQMEIAVRECKDEELIYMH 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01280 375 PANTHER FRINGE-RELATED 10 372 - -
Trre7g01280 375 Gene3D - 20 215 - -
Trre7g01280 375 Pfam Protein of unknown function, DUF604 96 348 IPR006740 -
Trre7g01280 375 FunFam Fringe-related protein-like 2 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01280 Trre-Chr7 9203802 9205812 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01280 4 340 Glycosyltransferase AT1G05280 58.140 1.46e-149 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01280 - - gmx:100784602 644.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g01280 7 9203802 9205812 Trre7g01280 7 9203802 9205812 ECH