Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01262 ATGGATTTCATCACCCAAGTTCTTTCTATTCGCGATGCGAAGAATAAAGACATAAGGGCTCTTTGTTTTCGCGCTTGTTTGAGTTTTTCACGTTTAAATAATTTGGTTCGTAATGCTATTAGGCATAATGTTAGAGAACTTGATATTGAAGTTGACACAGAAATTGATACAGATGATTTTTTCAACTTTCCTAGATGTGTTATTAGTAGTGAATCTTTGAAAGTTTTGAAATTGAAATCGGGTTTTCGTTTACCTCCATCATCGATTATGAGAAACGGGTTTCAATCTTTGCATACATTGTCGTTATCATTAGTTATTTTGTATAATCAGCCTTCTCTATCTGATCTATTTTCTGAATCGTCTTTTCCTCTTTTGAGAAATTTGCATCTTGATATGTGTTTCGGATTAACACATATTCGTGTTGGTTGTCGCGCTCTCGAAGATTTGAACTTAGAAAGATGTTATCAATTACAAGGTTTGGATGTTTGTGGCGCGAAAATTGAAAGAATGAGAGTAACAAGTTGTTTTGATGCATATTGTAACAAGACTTGGGTGAGAATGAATGTGCCAAAGCTTGAAAATTTGATTTGGAAATTTAATGCTGTGACCGATGTTACTGTTTTCGAGAATTCTAATTCTTTGAATGAGGCTTCCATTGGTTTCTTTATGTTGAAGGAAGGTAAAGTTAATATGGGTAGGCTTCAAAGTGCTAATGATTTCTTCTCTGGATTGTCTCGTGTTCGATCCTTGACTCTTGAAAGCCAGACTATCGAGATTCTATCAAAGTATAACATTATTATTCAACCATTTTATAATCTTAAATCATTAGAGTTACATACTGGTTTGAAGAAAAGAAATGTTCAAGCATTAGCATTCTTATTCAGAAGCTCTCCTACCCTCCACACATTGATTCTGGAGATCATTAATGATTACAAGGTTGAAAGAAAACAATGGAATAGGGACTTATGGAGCATGACTAGCACAGAGGAAGAGCAATATTGGGAATCACAAATTCCAAGTTTGAAATCTTTTCTACAACACTTGAAAGTGGTGAAAATTCAAGGATTTCTTGATTGTGCAAATGAAGTTACATTAGCTAAGTTTCTTCTAAAGTATGGAAAAGCTTTGGAAGAAATGATAGTGTGCACAGGATATTCAAATAGAAAAGATAGTTTGAGGAGACAAAACATAAGGTCACAAATGATGGGTTTTTCTTGGGCTTCTTCTAATGCCAAAGTGGAGTTTCAGTAG 1251 0.3429 MDFITQVLSIRDAKNKDIRALCFRACLSFSRLNNLVRNAIRHNVRELDIEVDTEIDTDDFFNFPRCVISSESLKVLKLKSGFRLPPSSIMRNGFQSLHTLSLSLVILYNQPSLSDLFSESSFPLLRNLHLDMCFGLTHIRVGCRALEDLNLERCYQLQGLDVCGAKIERMRVTSCFDAYCNKTWVRMNVPKLENLIWKFNAVTDVTVFENSNSLNEASIGFFMLKEGKVNMGRLQSANDFFSGLSRVRSLTLESQTIEILSKYNIIIQPFYNLKSLELHTGLKKRNVQALAFLFRSSPTLHTLILEIINDYKVERKQWNRDLWSMTSTEEEQYWESQIPSLKSFLQHLKVVKIQGFLDCANEVTLAKFLLKYGKALEEMIVCTGYSNRKDSLRRQNIRSQMMGFSWASSNAKVEFQ 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01262 416 PANTHER F-BOX/RNI SUPERFAMILY PROTEIN-RELATED 1 391 - -
Trre7g01262 416 Pfam FBD 342 380 IPR006566 -
Trre7g01262 416 SMART 9598neu4hmm 342 416 IPR006566 -
Trre7g01262 416 Gene3D Ribonuclease Inhibitor 92 393 IPR032675 -
Trre7g01262 416 SUPERFAMILY RNI-like 41 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01262 Trre-Chr7 8994178 8996009 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01262 - - adu:107477862 619.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g01262 7 8994178 8996009 Trre7g01262 7 8994178 8996009 ECH