Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01260 ATGCCAGAGGCTCCAAAACAAAACCTATTCAACAAGAAAAATGTTGAAAATTATAATGGTATTATTAGTAATACTATTAATCACAACAATAAGAAAGCACTGAAATACATTGAGGATGTTACCATTAACACAGATGAAATTCAAGAAAGAGTACTTGCTGAAATTCTTTCTTCTAATGCTCTTGTTGAGTATCTTCAACACCATGGGCTTAATGGGAACACTGATAGAAAAACTTTCAAAAGGGTGTTGCCTGTGGTGACTTATGAGGATTTGAAGATGGATATTGATCGTATAGCTAATGGTGATACCTCCCCAATTTTATGCTCTAAACCTATATCTGAGTTCCTCACTAGCTCTGGAACATCAGGAGGGGAGAGAAAATTGATGCCAACAATAGAAGAAGAGTTAGAGAGAAGATCATTACTTTACAGCCTTTTAATGCCAGTGATGGATCAATTTGTTCCCAATTTAGAGAAAGGCAAAGGAATGTACTTTTTGTTCACAAAATCAGAAGCAAAAACACCTGGTGGATTACTTGCACGTCCTGTTTTAACAAGTTACTACAAAAGCACACACTTTAAGAACAAATCACATGAAAATGATCCTTATACAAATTACACTAGCCCAATTCAAACCATTCTTTGTCTAGATTCTTATCAAAGCATGTATTCTCAAATCCTTTGTGGTCTTTACCAAAACGAACAAGTTCTTCGTGTCGGTGCTGTTTTTGCTTCTGGTTTCATTCGCGCCGTTAAATTTCTCGAAAAACATTGGGTCCGTTTGTGTCACGACATACGAAAGGGTACCATAGACGGTGAAATCACCGACCCGGATGTACGAGAGGCGGTGATGAAAATACTTATACCGAATCCAAAGCTTGCGGCTTTCGTAGAATCCGAATGCAAGAAAGAGTCATGGAAAGGGATCATTACTAGGTTATGGCCTAATACAAAATATGTTGATGTTATTGTTACTGGAACAATGTCTCAATATATTCCAATTTTAGATTACTATAGTAATGGTCTTCCTCTTGTGTGCACTATGTATGCTTCTTCTGAGTGTTACTTTGGCCTTAACTTAAATCCTTTGTGTGATCCAAGTGAGGTATCTTATACACTTATTCCTACTATGGCCTACTTTGAGTTCTTGCCTCTTAACAAGATTGATGAAAATGCTGATTCAATTTCAGCCTCAGAACAAGAACATTTAGTTGATCTTGTAGATGTTGAGTTGGGCCAAGAATATGAGCTTGTGGTCACCACTTATGCAGGACTTTATAGGTACAGAGTTGGTGACATACTCCGCGTAGCAGGATTCAAGAACAAGGCACCTCAATTTAACTTCATATGCCGAAAGAATGTCGTTCTAAGCATCGATTCAGACAAAACCGATGAAGTTGAGTTACAAAACGCTGTAAAGAATGGATCAAACCATCTTTCAAACTACAATGCATCACTAACAGATTACACAAGTTCTGCTGACACATCCACAATTCCAGGCCACTACATACTCTACTGGGAAATCAGCAAGAACAATCAAAACCAAATTCCCGATTCTGTTTTCGAAGAATGTTGTTTTACAGTTGAAGATTCTCTCAACAGCGTTTATCGTCAAGGAAGAATAACAGAATCAATTGGGCCATTGGAAATTAAGGTTGTTGAGAATGGAACATTTGATAAGGTTATGGATTTTGCTCTTAGTCAAGGTGCTTCTATAAATCAATATAAGACACCTCGTTGTGTGAAATATGCTCCTATATTAAAGCTTCTTAATTCTAAGACAGTTTCTAGTTTCTTTAGTCCAAAATGTCCACAATGGGTTCCTGGTCATAAGAAGTGGTGCACCCTTGACTGA 1854 0.3738 MPEAPKQNLFNKKNVENYNGIISNTINHNNKKALKYIEDVTINTDEIQERVLAEILSSNALVEYLQHHGLNGNTDRKTFKRVLPVVTYEDLKMDIDRIANGDTSPILCSKPISEFLTSSGTSGGERKLMPTIEEELERRSLLYSLLMPVMDQFVPNLEKGKGMYFLFTKSEAKTPGGLLARPVLTSYYKSTHFKNKSHENDPYTNYTSPIQTILCLDSYQSMYSQILCGLYQNEQVLRVGAVFASGFIRAVKFLEKHWVRLCHDIRKGTIDGEITDPDVREAVMKILIPNPKLAAFVESECKKESWKGIITRLWPNTKYVDVIVTGTMSQYIPILDYYSNGLPLVCTMYASSECYFGLNLNPLCDPSEVSYTLIPTMAYFEFLPLNKIDENADSISASEQEHLVDLVDVELGQEYELVVTTYAGLYRYRVGDILRVAGFKNKAPQFNFICRKNVVLSIDSDKTDEVELQNAVKNGSNHLSNYNASLTDYTSSADTSTIPGHYILYWEISKNNQNQIPDSVFEECCFTVEDSLNSVYRQGRITESIGPLEIKVVENGTFDKVMDFALSQGASINQYKTPRCVKYAPILKLLNSKTVSSFFSPKCPQWVPGHKKWCTLD 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01260 617 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 30 603 IPR004993 -
Trre7g01260 617 Pfam GH3 auxin-responsive promoter 37 582 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01260 Trre-Chr7 8988300 8993264 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01260 22 600 EF-hand Containing Proteins AT1G23160 48.896 0.0 565
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01260 K14487 - gmx:100819676 1043.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g01260 7 8988300 8993264 Trre7g01260 7 8988300 8993264 ECH