Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01253 ATGTTTAAGTTTTCTTGTTTTCATGTTAATGTCCAAGGCAACAAGGCAAAGAAAATAGCTCAACCTTCTTCTGAAGCAATGGCAAAAGCTTTGCGAGATAGTTCCAAAAAGCTAGTCAGTAAAGATTTGTCTACCCCTACGAGCTTAAATTCTTCACCTTCAAAACAACATTCACATAAGCTAATGAATGTTTCTGAGAATGATATTCTCGACCAGGATTCAGTTGAGCGCATTGAACTTAACAGAAAAGTCCACCAAATTGGGCGTCTCAGGAAAAGTCAGTCGGATAGTGAGCTTTGCCAAATCATAACTGAGGGTGATCAAGATACGGGGTTTTCCAAAAGCCACCATGACTCACCAAATTCAATAGGCAGCCCTAATGAGCAATCTAAAACGGATTCAAACTTCGAGTTTCAAGTCATTCCTGGCCGTTGCAATGATAGCTCAATTTTTTCAATAGGAGATCTCACGCCTTCGGAGAAAGATGCTCGTGAAAATTCTGATACTCCATTATCTGGCGATCTTGCCGGTGACTCTGCTGGCCGGAATTCTGGTCCCAATACACCAACTTTAAGGAAGTCACGTTCCGTACCCAATATCAATGCTTCTATGCATACTTCTGGAAATAATCACGCATTTAAACATGCATCATCAATGTCAAGGTCTTCTGATGATCTTTGTGCTTTAGGCTTGAGGAAGAAAGAAGTGTTCATCAACGAGTCTTATGATCAAATTAGGGAAACTCAAGAAAGTGGCATGGAAAAAACTGAAGATAATCATATGGACAGATACTTCGACGATGGTTTTGATTCTCATCTGCTTTCTGGCTCACCAAAAGACTGGATAAGACCGGTTACAGATGATATAACTGATGCAGAACCTCTACATGGAGATTCCTCGAGTCAATCTCCTAACATGAATTTTAACGTTAAGCGGATTGAGGATTGGGTAAGCAATTTGCAGGACTGTGAACCACCTCCAGAGGATATAATTGAATTGCCTGAATCTCTTGATCCAGTTGTTGATGTTAACACCGCAAACGTTGCGATTGCTTCAGCTGTGGATCATAAGATCACTCCAGGAATGGAAGCAGCTAAAAGATATATATCTTCTTTGACTGCCAATGCCACTACAGCTCAGCTGGCAAATCATGGGTTGGTTGTGATCCCCTTTTTGAGTGCATTTGTGAGTTTGAAGGTGCTCAATTTGTCTGGAAATGCAATTGTAAGAATAACTGCTGGTACTCTTCCTCGAGGACTTCACACATTGAATTTGTCAAAAAACAATATCGCCACTATAGAGGGATTACGCGAACTTACCCGGCTTCGTGTCCTAGACCTCAGTTACAACCGTATACTAAGAATTGGACACGGTTTGGCATCATGTTCTTCTCTAAAGGAGCTGTACCTTGCTGGAAACAAAATCGGTGAAGTGGAGGGTTTGCACCGCCTGTTGAAACTAAGTATCTTGGATCTTCGTTTTAACAAGATTTCAACTGCCAAATGTCTTGGACAACTTGCAGCCAACTATAATTCTTTGCTAGCTATCAACTTGGAAGGGAACCCTTGCCAGAAAAACGTTGGAGATGAACAAATTAAGAAATATCTGCAAGGCCTACTTCCCCATCTTGTCTACTACAATCGGCAGCCATTCAAAGCGAACGGTTTGAAGGACGGTGCAGATCGTGCAGTTCGTTTAGGAATGAATTCGCAACAGTTTGATCGCAGTCTTAGAGTGGATCGCAAGACTACAAGGAAGGGGTCATCATCTTCTCGGAGGCCATCTTCTACGTCCTCGCCAAAAGTGTCCACGCCAAAAGTGTCCAAAGGAAAGCAAGCCCATCTCCCACCTATCAGAACAAAACCATCAATCCAAACTCGCTATCATTTTGATTCACCCAACAAAGAATTGACCTTGAAGTCGGACAACTTCATGCGCAAAAGTCGCAGCGAGGGAACTCTTCTTGGAGCTTTGTAA 1977 0.4224 MFKFSCFHVNVQGNKAKKIAQPSSEAMAKALRDSSKKLVSKDLSTPTSLNSSPSKQHSHKLMNVSENDILDQDSVERIELNRKVHQIGRLRKSQSDSELCQIITEGDQDTGFSKSHHDSPNSIGSPNEQSKTDSNFEFQVIPGRCNDSSIFSIGDLTPSEKDARENSDTPLSGDLAGDSAGRNSGPNTPTLRKSRSVPNINASMHTSGNNHAFKHASSMSRSSDDLCALGLRKKEVFINESYDQIRETQESGMEKTEDNHMDRYFDDGFDSHLLSGSPKDWIRPVTDDITDAEPLHGDSSSQSPNMNFNVKRIEDWVSNLQDCEPPPEDIIELPESLDPVVDVNTANVAIASAVDHKITPGMEAAKRYISSLTANATTAQLANHGLVVIPFLSAFVSLKVLNLSGNAIVRITAGTLPRGLHTLNLSKNNIATIEGLRELTRLRVLDLSYNRILRIGHGLASCSSLKELYLAGNKIGEVEGLHRLLKLSILDLRFNKISTAKCLGQLAANYNSLLAINLEGNPCQKNVGDEQIKKYLQGLLPHLVYYNRQPFKANGLKDGADRAVRLGMNSQQFDRSLRVDRKTTRKGSSSSRRPSSTSSPKVSTPKVSKGKQAHLPPIRTKPSIQTRYHFDSPNKELTLKSDNFMRKSRSEGTLLGAL 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01253 658 FunFam Protein phosphatase 1 regulatory subunit pprA 356 537 - -
Trre7g01253 658 ProSiteProfiles Leucine-rich repeat profile. 419 440 IPR001611 GO:0005515
Trre7g01253 658 SMART LRR_sd22_2 462 483 - -
Trre7g01253 658 SMART LRR_sd22_2 484 508 - -
Trre7g01253 658 SMART LRR_sd22_2 417 438 - -
Trre7g01253 658 SMART LRR_sd22_2 439 461 - -
Trre7g01253 658 ProSiteProfiles Leucine-rich repeat profile. 464 485 IPR001611 GO:0005515
Trre7g01253 658 MobiDBLite consensus disorder prediction 589 606 - -
Trre7g01253 658 SMART LRR_typ_2 439 462 IPR003591 -
Trre7g01253 658 SMART LRR_typ_2 484 506 IPR003591 -
Trre7g01253 658 SMART LRR_typ_2 395 418 IPR003591 -
Trre7g01253 658 MobiDBLite consensus disorder prediction 571 634 - -
Trre7g01253 658 Pfam Leucine-rich repeat 401 498 - -
Trre7g01253 658 PANTHER NISCHARIN RELATED 206 612 - -
Trre7g01253 658 MobiDBLite consensus disorder prediction 32 67 - -
Trre7g01253 658 MobiDBLite consensus disorder prediction 181 197 - -
Trre7g01253 658 MobiDBLite consensus disorder prediction 149 197 - -
Trre7g01253 658 MobiDBLite consensus disorder prediction 40 60 - -
Trre7g01253 658 ProSiteProfiles Leucine-rich repeat profile. 441 463 IPR001611 GO:0005515
Trre7g01253 658 MobiDBLite consensus disorder prediction 107 133 - -
Trre7g01253 658 Gene3D Ribonuclease Inhibitor 348 536 IPR032675 -
Trre7g01253 658 SUPERFAMILY Outer arm dynein light chain 1 386 549 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01253 Trre-Chr7 8913313 8915636 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01253 - - lang:109355198 767.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g01253 7 8913313 8915636 Trre7g01253 7 8913313 8915636 ECH