Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01221 ATGAGGAAAAATGTTGGTTCTCATTCAGGAAGGATGTTTAGTGACAAGAAATGGATTATCCCATTTTTTGCAAGTTTGTTGGTATCTGTGAGTTTGGTTCTGACAGCTATTCTTGGATCGTTTAGTTCTGCTGGTGGTGGGGGAGAGGAGTTGCCGTTGGTTGATGTCATTTCATTCAAGGAGGGATCAGAGGATTCCGGTGGATATTTCGTGGAGTCGGATTTGGAAAGGTCTGTTAATACTAGTGTGGTTGTGCAGATGAAGGCGCCTAAGTTTGCATATCTTATTTCGGGCACAAAGGGTGATAGTCATAGGATGATGAGGACGTTAGAGGCGGTTTATCACCCAAGAAACCAGTATGTTTTGCATTTGGATCTTGAGGCGCCGCCTCGGGAAAGGTTGGAATTGGCAAATGCAGTGAAAGCTGATCCGGTATTTAGGGAAGTGGAGAATGTGCGTGTTATGTCTCAATCCAATTTGGTTACCTATAAGGGTCCTACGATGATTGCTTGCACTCTTCAAGCTATTGCAATACTACTGAAGGAGAGCTCAGAGTGGGACTGGTTTATAAACCTTAGTGCCTCAGATTATCCTCTTGTGACACAAGATGATATGCTTCATGTTTTCTCTAATCTGTCAAGAGATCTCAATTTCATTGAACATACACGCATTACCGGTTGGAAATTGAACCAAAGAGCAAGGCCCATCATTATTGATCCTGCCCTTTACTTATCGAAGAAATCTGATTTAGCATTGACTACTCAAAAAAGAACACTACCCACATCTTTTAAATTGTTCACTGGTTCAGCTTGGGTTGTACTAACACGGTCTTTTGTGGAGTACTGTATATGGGGATGGGATAACTTTCCGCGGACTATGCTTATGTATTATACAAATTTTGTCTCTTCGCCAGAGGGATATTTTCACACTGTCATTTGTAACACTCAGAAATTTCGGCACACAGCAATAAGCCACGATCTTCACTATATTGCTTGGGACAGTCCACCAAAGCAACATCCCATCTCTTTAACAATGAAGGACTTTGACAAAATGGCCAAGAGCAATGCTCCCTTTGCCCGAAAATTCCCCAAGGATGATCCAGTCCTAGACAAGATTGACAAAGAACTTTTGAATCGCACACATAGATTTTCACCAGGGGGGTGGTGTATCGGGACATCAGATGGTGGAGCGGACCCGTGTTCTTTGCGCGGCAACGATACAGTGTTTAGGCCAGGGCCTGGTGCCGAGAAGCTACACAAGCTGCTTCAGGTGCTGTTATCTGAAGAGTTTCTAAGCAAACAGTGTTTGTGA 1311 0.434 MRKNVGSHSGRMFSDKKWIIPFFASLLVSVSLVLTAILGSFSSAGGGGEELPLVDVISFKEGSEDSGGYFVESDLERSVNTSVVVQMKAPKFAYLISGTKGDSHRMMRTLEAVYHPRNQYVLHLDLEAPPRERLELANAVKADPVFREVENVRVMSQSNLVTYKGPTMIACTLQAIAILLKESSEWDWFINLSASDYPLVTQDDMLHVFSNLSRDLNFIEHTRITGWKLNQRARPIIIDPALYLSKKSDLALTTQKRTLPTSFKLFTGSAWVVLTRSFVEYCIWGWDNFPRTMLMYYTNFVSSPEGYFHTVICNTQKFRHTAISHDLHYIAWDSPPKQHPISLTMKDFDKMAKSNAPFARKFPKDDPVLDKIDKELLNRTHRFSPGGWCIGTSDGGADPCSLRGNDTVFRPGPGAEKLHKLLQVLLSEEFLSKQCL 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01221 436 Pfam Core-2/I-Branching enzyme 92 351 IPR003406 GO:0016020|GO:0016757
Trre7g01221 436 PANTHER GLYCOSYLTRANSFERASE 15 435 IPR044610 GO:0015020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01221 Trre-Chr7 8643113 8647032 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01221 79 435 Glycosyltransferase AT1G03520 76.471 0.0 607
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01221 - - gmx:100795146 762.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g01221 7 8643113 8647032 Trre7g01221 7 8643113 8647032 ECH