Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01218 ATGGCAACCCAAAACAACAACGGTTCAGAACCTGACCCAAACCCTATTGCGGCGGAGACACCACAACCGGTGCCCGAAAATCTTCTCAGTAACAACAAAGGGTCGGAACTTGACCCGAACCATGTTGCGGCGAAGACACAGGTAACAGAACCTGAAAAGCTTGATAGTTTGGGTGATGAAATTCCTATTGAGAAAATTGTAGAAAAGATTACGTTGGTGGAAGATTCTCCTTCAGTTGAGGTGAATGTGAATGAAGATAAAGATGAAAAAGAAGATGATAGTGAAAGTGAGAGCGAGAGTGAAAGCTCAGAGTCAGAGAGTTCTTCTTCATCATCATCGGCGTCATCTTCATCATCTGATTATGGTAGTGATGATAATGAAGATGACGGCGATATGAAAGATGAAGATGGAGAGATAAGTGATTCTGATGAAGAGAAGATGGTTAGTTGGAGTCCTACTGTTGATGTTGATTTTGATGAGGAGGATGTTGTAGTAGGACCAATTAGGTCAAAGAATGAGATTCAGAATTTGCCTCCAGTTCCTCCGGTTGATGTGACTTTAGAACCTCACCATAAAATGGTACCCATTGGAGTTGTTATGTCGACTCTTGGTGCTCAAGTCATCGTCGAAGGAGTGGAGAAGCATGAACCTCTTAATGAGGGTTCTATTCTCTGGCTGACTGAAAGCCGCAAACCACTAGGTTTAGTTGATGAAATCTTTGGACCAATCAAAAACCCGTATTATATTGTGAGATACAATTCTGAAAGTGAAGTCCCTGCGGGGATCCAAGGGGGAACAACTCTGGTCTCATGTGTTCCAGAATTTGCTGATCGTGTGCTTAATAATAAGGATCTTTACCGGAAAGGCTATGATGCATCTGGTGCGAATGATGAAGAGTTGTCTGATGAAGTAGAGTTTTCAGATGACGAAAAAGAGGCTGAATACCGGAAAATGCAGAAAATGACAAAGAGAGGGGTAAATGATCAAAATCCTGGCAAGAGAAAAAACAATAAAAAGAAATTTTCACCAAGAGACAATAGGTTACCTACCATCCCCAATGCACCTGCAGCAGCACAGTATGTATTACCTACTGTCTCTCATGCACCTGCAGCAGCACCATTGGTTAATCATGGGAGCCATTCTCCTTTTTTAGGCATTGGGCAAGGTGGAACTACCACAATTTCTCAATTTCAACCTTTAAATGCAGGTCCTAACTTTGCTGCAAACGGAATGTGGACAAATCAGGCAATATTTCAACAGCAGCCACAACCTTCCCAGTTTCCAAATGCATTTCCATCAAATGCCATGTCATATTTTCCACAAAACACACAATTTTCTCAGTTTCCTGTGCCAGGAAATCCATTTCAACAGCAAATGAATCCCAGTCACGGAACTCAATTCCCAACCATGATGCCTGGCGTACAGCCCAATATATTTGCACAACAACCAATGTATGCACCGGGGTTTGTGGGTCAAAACCAAATGCCATTTGATTCAAGACCACCCTTCCAACAGATTCAGCAACCACCCATCTTTCAAACACAGCAGCAGGGTTTTTCACCCAATGAGTTACAGCAACAGCCTATCTTTCAAGCGCAGCAGCAGGGTTTTCCACCAGCTGAGTTGCAGTCAGAAAGAAACCTAAACTTGCGTCCTAGTTCTAATTCTAGCAACCCCTCTCAATTTCATCCGGGTTCATCAGGTAGCCGAGGGAGACCAACATTTCGTGGCGCCGGTAGGAGAGGTTGGCGACCTGCTAGGTGA 1764 0.4354 MATQNNNGSEPDPNPIAAETPQPVPENLLSNNKGSELDPNHVAAKTQVTEPEKLDSLGDEIPIEKIVEKITLVEDSPSVEVNVNEDKDEKEDDSESESESESSESESSSSSSSASSSSSDYGSDDNEDDGDMKDEDGEISDSDEEKMVSWSPTVDVDFDEEDVVVGPIRSKNEIQNLPPVPPVDVTLEPHHKMVPIGVVMSTLGAQVIVEGVEKHEPLNEGSILWLTESRKPLGLVDEIFGPIKNPYYIVRYNSESEVPAGIQGGTTLVSCVPEFADRVLNNKDLYRKGYDASGANDEELSDEVEFSDDEKEAEYRKMQKMTKRGVNDQNPGKRKNNKKKFSPRDNRLPTIPNAPAAAQYVLPTVSHAPAAAPLVNHGSHSPFLGIGQGGTTTISQFQPLNAGPNFAANGMWTNQAIFQQQPQPSQFPNAFPSNAMSYFPQNTQFSQFPVPGNPFQQQMNPSHGTQFPTMMPGVQPNIFAQQPMYAPGFVGQNQMPFDSRPPFQQIQQPPIFQTQQQGFSPNELQQQPIFQAQQQGFPPAELQSERNLNLRPSSNSSNPSQFHPGSSGSRGRPTFRGAGRRGWRPAR 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01218 587 MobiDBLite consensus disorder prediction 533 587 - -
Trre7g01218 587 Gene3D Probable tRNA pseudouridine synthase domain 165 269 IPR038664 -
Trre7g01218 587 MobiDBLite consensus disorder prediction 86 102 - -
Trre7g01218 587 MobiDBLite consensus disorder prediction 533 568 - -
Trre7g01218 587 MobiDBLite consensus disorder prediction 310 335 - -
Trre7g01218 587 MobiDBLite consensus disorder prediction 1 152 - -
Trre7g01218 587 SUPERFAMILY Translation proteins 193 256 IPR009000 -
Trre7g01218 587 MobiDBLite consensus disorder prediction 122 142 - -
Trre7g01218 587 FunFam H/ACA ribonucleoprotein complex non-core subunit NAF1 165 271 - -
Trre7g01218 587 MobiDBLite consensus disorder prediction 291 351 - -
Trre7g01218 587 Pfam Gar1/Naf1 RNA binding region 194 258 IPR007504 GO:0001522|GO:0042254
Trre7g01218 587 PANTHER H/ACA RIBONUCLEOPROTEIN COMPLEX NON-CORE SUBUNIT NAF1 59 495 IPR040309 GO:0000493|GO:0003723|GO:0005732|GO:0042254
Trre7g01218 587 MobiDBLite consensus disorder prediction 103 121 - -
Trre7g01218 587 MobiDBLite consensus disorder prediction 52 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01218 Trre-Chr7 8619409 8622375 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01218 K14763 - gmx:102661630 543.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g01218 7 8619409 8622375 Trre7g01218 7 8619409 8622375 ECH