Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01210 ATGGAACAACCAATACTTCTTAGCAATATCAACAATGGTAGTGGATGTTTTGACTATGAAAAGATTATTACTTGGTTTGAAGATGTAACTAAGAACACAAGCTTTGTTCAAACTCAGATATTAAGCAATATTCTGAAACAAAATCATGATGTTGAATATCTCAAAAAATGGTTAGGGGATTACAATATTTTGGAAATGGAACCATGTGCATTGGAATCCCTTTTCACTTCTTTGGTTCCTATTGCTTCTCATGCTGATTTTGAACCATTTATTCAAAGAATTTCTGATGGAGACTCTGCTCCTTTACTCACTCAACAACCTATAACCACTCTTTCCTTAAGTTCTGGAACCACTGAAGGAAGGCAGAAATTCGTACCCTTTACCAGACATAGTGCTCAAACCACGCTTCAAATATTCACTTTATCAGCTGCCTATAGATCAAGGGTTTACCCCATAAGGGAAGGAGGAAGGATTCTTGAATTCATATATGGCAGCAATTGTTTCAAAACAAAAGGAAATTTAACAGTTGGAACAGCCACAACACATTGTTATGCAAGTGAAGAATTCAAAACCAAACATAACAAAACAAAATCATTTAGTTGTAGCCCACAAGAAGTGATTTTCAATGGAGATTATAAACAATCAACTTATTGCCACCTTCTTCTTGGCCTATTCTATTCTCAACAAGTAGAATTTATCACTTCAGCTTTTGTCTATACCATGGTACAAGCATTCACTACATTTGAAGAAAATTGGAGAGAAATTATTAATGACATTAAAAATGGTACTCTAAGTTCAAGAATTAAGTCACCAAAATTAAGAGAAGCTATTTTGGACATAATTAATTGTACTAAAAGTGGTCCAAACATAAAGTTGGCTTCAAAATTAGAAGATTATTGTGAGGAGCTAGAAAAAGTTGATTGGTATGGTTTGATTCCAAAGATATGGCCAAATGTGAAGTACTTGTATTCAATAATGACAGGTTCAATGCAACCATATTTGAAAAAACTTAGACATTATGCAAATGGATTGCCATTAATTAGTGCTGATTATGGATCAACTGAAAGCTGGATTGGAGTTAATGTTGATCCATGTTTGAGTCCAGAAGAAGTAACATTTGCTGTTGTGCCAACTTTCTCTTATTTTGAGTTCATACCTCTTCATAGAAATAAACAAGATTGCAGTGATTTTGTTGAAGATAAGCCAATTCCATTGTCAAAGGTTATTGTTGGACAACAGTATGAAATTGTCCTCACAACTTTTACAGGGTTGTACAGATGCAGGCTAGGAGATGTGGTAGAAGTGGCAGGATTTCACAATGGGACCCCAAAATTGAACTTTATATGCAGAAGAAAATTAATTCTAACAGTAAACATAGATAAAAATACAGAGAAGGACCTACAATTAGTGGTAGAGAGAGGGTCACATATTCTAAATAAAGCAAAAGCTGAAATTGTTGATTTCACTAGTTATGCTGATGTAACAAACCAACCTGGTCACTATGTTATTTACTGGGAGATTAAAGGTGAAGTTGAAGACAATGTCCTTCATGCTTGTTGTAGAGAAATGGACCTATCTTTTGCTGATCATGGTTATGTTGTTTCAAGAAAAACCAATTCAATTGGGCCACTTGAACTTTGCATTTTGGAGAGTGGTGCTTTTAAGAAGATTTTGGATAATTTCATTGCCAATGGTGTTGCTTTGAACCAATTTAAGACTCCTAGGTGCACTAACAATCATGTCTTGCTCAAAATTCTTGACAATTGTACCACTAAAAGGTTTCTTAGCACAGCTTATAGTTTAGATTAA 1809 0.3438 MEQPILLSNINNGSGCFDYEKIITWFEDVTKNTSFVQTQILSNILKQNHDVEYLKKWLGDYNILEMEPCALESLFTSLVPIASHADFEPFIQRISDGDSAPLLTQQPITTLSLSSGTTEGRQKFVPFTRHSAQTTLQIFTLSAAYRSRVYPIREGGRILEFIYGSNCFKTKGNLTVGTATTHCYASEEFKTKHNKTKSFSCSPQEVIFNGDYKQSTYCHLLLGLFYSQQVEFITSAFVYTMVQAFTTFEENWREIINDIKNGTLSSRIKSPKLREAILDIINCTKSGPNIKLASKLEDYCEELEKVDWYGLIPKIWPNVKYLYSIMTGSMQPYLKKLRHYANGLPLISADYGSTESWIGVNVDPCLSPEEVTFAVVPTFSYFEFIPLHRNKQDCSDFVEDKPIPLSKVIVGQQYEIVLTTFTGLYRCRLGDVVEVAGFHNGTPKLNFICRRKLILTVNIDKNTEKDLQLVVERGSHILNKAKAEIVDFTSYADVTNQPGHYVIYWEIKGEVEDNVLHACCREMDLSFADHGYVVSRKTNSIGPLELCILESGAFKKILDNFIANGVALNQFKTPRCTNNHVLLKILDNCTTKRFLSTAYSLD 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01210 602 Pfam GH3 auxin-responsive promoter 25 579 IPR004993 -
Trre7g01210 602 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 16 599 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01210 Trre-Chr7 8572013 8578463 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01210 26 597 EF-hand Containing Proteins AT1G23160 33.959 1.91e-114 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g01210 K14487 - gmx:100792358 991.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g01210 7 8572013 8578463 Trre7g01210 7 8572013 8578463 ECH