Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00840 ATGGCAAGCTTGAGAGTTACATGTATGGTTGCATTGATGTGCATGGTGATGGTTAGTGCACCAATGGCTGAAGCTGCAGTCTCATGTGGAGCAGTAACTGGTTACCTTGTTCCATGCATTACTTATCTTCAAGGTGGTCCTGGTCCTTCACCAGGATGCTGTGGTGGAGTTAGGAAACTTAACGCGGCAGCCCGCACTACACCCGACCGCAAGGCCGCTTGCAACTGCTTGAAAGGTGCTGCTGGTTCCATTGCTCGTTTGAATAACAACGCCGCCGCTGCTCTCCCCGGCAAATGTGGTGTTAGCATTCCCTACAAGTTTAGCACCTCTACCAACTGTAATAGCATCAGGTTCTAA 357 0.5014 MASLRVTCMVALMCMVMVSAPMAEAAVSCGAVTGYLVPCITYLQGGPGPSPGCCGGVRKLNAAARTTPDRKAACNCLKGAAGSIARLNNNAAAALPGKCGVSIPYKFSTSTNCNSIRF 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00840 118 Gene3D - 26 118 IPR036312 -
Trre7g00840 118 ProSitePatterns Plant lipid transfer proteins signature. 95 116 IPR000528 GO:0006869|GO:0008289
Trre7g00840 118 PRINTS Plant phospholipid transfer protein signature 48 62 IPR000528 GO:0006869|GO:0008289
Trre7g00840 118 PRINTS Plant phospholipid transfer protein signature 104 115 IPR000528 GO:0006869|GO:0008289
Trre7g00840 118 PRINTS Plant phospholipid transfer protein signature 69 84 IPR000528 GO:0006869|GO:0008289
Trre7g00840 118 PRINTS Plant phospholipid transfer protein signature 28 44 IPR000528 GO:0006869|GO:0008289
Trre7g00840 118 PRINTS Plant phospholipid transfer protein signature 86 103 IPR000528 GO:0006869|GO:0008289
Trre7g00840 118 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 28 116 IPR036312 -
Trre7g00840 118 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 2-RELATED 6 114 IPR000528 GO:0006869|GO:0008289
Trre7g00840 118 FunFam Non-specific lipid-transfer protein 26 117 - -
Trre7g00840 118 SMART aai_6 29 113 IPR016140 -
Trre7g00840 118 CDD nsLTP1 27 114 - -
Trre7g00840 118 Pfam Protease inhibitor/seed storage/LTP family 29 113 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00840 Trre-Chr7 5625697 5627006 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00840 7 117 Acyl Lipid Metabolism Gene Families AT5G59320 53.153 1.09e-34 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00840 - - psat:127108121 160.229