Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00837 ATGGCTAATTTCAAGTTGGCATGTGTTGTTTTAATATTCATGGTTTCGTTGTATGCACAAAATGGATATGCAATTACATGTGGACAAGTCATAAATAACCTTATATCATGCGTAGGTTATCTTCAAAACGGTGGTCCCGTTACGGCGGATTGTTGTAATGGTGTTAGAGCGATCGCTAACGCGGCAGTTAGGACAATCAATGACCTCCGTACTACTTGCTACTGCTTGAAGTCTGCTGCTTATAATTTCAAAAGTATTAATGAAAACAATGCTGCTTTACTCCCTGGAAAATGTGGAATTAAGATCCCTTACAAGATTAGTACTTCCGTCAACTGTGCTAGCATCAAGGTGTGA 354 0.3927 MANFKLACVVLIFMVSLYAQNGYAITCGQVINNLISCVGYLQNGGPVTADCCNGVRAIANAAVRTINDLRTTCYCLKSAAYNFKSINENNAALLPGKCGIKIPYKISTSVNCASIKV 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00837 117 Pfam Protease inhibitor/seed storage/LTP family 27 110 IPR016140 -
Trre7g00837 117 PRINTS Plant phospholipid transfer protein signature 26 42 IPR000528 GO:0006869|GO:0008289
Trre7g00837 117 PRINTS Plant phospholipid transfer protein signature 68 83 IPR000528 GO:0006869|GO:0008289
Trre7g00837 117 PRINTS Plant phospholipid transfer protein signature 85 102 IPR000528 GO:0006869|GO:0008289
Trre7g00837 117 PRINTS Plant phospholipid transfer protein signature 103 114 IPR000528 GO:0006869|GO:0008289
Trre7g00837 117 ProSitePatterns Plant lipid transfer proteins signature. 94 115 IPR000528 GO:0006869|GO:0008289
Trre7g00837 117 Gene3D - 24 117 IPR036312 -
Trre7g00837 117 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 2-RELATED 7 113 IPR000528 GO:0006869|GO:0008289
Trre7g00837 117 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 25 114 IPR036312 -
Trre7g00837 117 CDD nsLTP1 25 112 - -
Trre7g00837 117 SMART aai_6 27 112 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00837 Trre-Chr7 5609294 5610319 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00837 11 116 Acyl Lipid Metabolism Gene Families AT5G59310 47.170 4.33e-26 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00837 - - psat:127107290 146.747