Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00802 ATGGGTTACTCAACTATGACCATTAGGTTTGTTTGTATGGCAATTGTTTGCCTTGTGACTTTTGGTCCTAAGGCTGAAGCAGCTGTGTCATGTGGTCAAGTTGTGAACAACTTAACACCTTGTGTTTCTTACATAATTTATGGTGGGAACGCTGTCCCTGCGCAGTGTTGTAATGGAGTGAGAAACCTTAATAACATGGCTCAAAACACCCCAGATCGTAGAGCTGTTTGTAACTGCATTAAGAATGCTGTCAGCTCAAGTGGTTTCACTTACACTAGATTCAATCTTGACATTGTTGCTGGTATTCCAAGTAAATGTGGGGTTAACATTCCTTACCAGATCAGCCCTAATACCAACTGTAACAGGTACTACTTATAA 378 0.4074 MGYSTMTIRFVCMAIVCLVTFGPKAEAAVSCGQVVNNLTPCVSYIIYGGNAVPAQCCNGVRNLNNMAQNTPDRRAVCNCIKNAVSSSGFTYTRFNLDIVAGIPSKCGVNIPYQISPNTNCNRYYL 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00802 125 SMART aai_6 31 120 IPR016140 -
Trre7g00802 125 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 28 122 IPR036312 -
Trre7g00802 125 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 2-RELATED 9 121 IPR000528 GO:0006869|GO:0008289
Trre7g00802 125 Pfam Protease inhibitor/seed storage/LTP family 31 120 IPR016140 -
Trre7g00802 125 Gene3D - 28 123 IPR036312 -
Trre7g00802 125 CDD nsLTP1 29 121 - -
Trre7g00802 125 PRINTS Plant phospholipid transfer protein signature 93 110 IPR000528 GO:0006869|GO:0008289
Trre7g00802 125 PRINTS Plant phospholipid transfer protein signature 51 65 IPR000528 GO:0006869|GO:0008289
Trre7g00802 125 PRINTS Plant phospholipid transfer protein signature 30 46 IPR000528 GO:0006869|GO:0008289
Trre7g00802 125 PRINTS Plant phospholipid transfer protein signature 111 122 IPR000528 GO:0006869|GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00802 Trre-Chr7 5299926 5300303 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00802 8 121 Acyl Lipid Metabolism Gene Families AT2G38540 45.217 1.52e-31 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00802 - - gmx:100793733 171.785