Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00800 ATGAGAAAATCGACCAGAATTTCTTCCATTGGTCTCGGCCAAGCTACAGAACCGGTGGTGAAGAATATCAGTACTCATTTTTCTCTCACAGCGTTTGCGAATCGTGTTAAGCATCTAACCGAGGAACAAAGTATGGCGATATCGCGAACAGGATTTGGTAGCTTGCTATCCATTCCAAAACAAACTTTGAACAAGGTTTTCCTTACTGAGGTAATGGAGGCTTGGAATTCTGAAAGGCAAGTTTTCGAGATTGGTTCAGGGGAAATCGGATTTAGTTTGTTGGATGTTGCATTAATTTTGGGGCTTCCGGTGGCCGGACACCGTGTGGAGTTGGTGGAGGAGGAATTGTTTTCTGATTTGGAAGAGGAGTATGGGGCTACACGTGCGAAGAGAAAGGTTTCTATGGCTACTCTTGAAGCGAGGCTTGATTCCATTGGAAAAGTTGTGAGTGATGATTTTGTGAGGAGCTTTTTGCTTTTTACGATTGGGACTTTCCTTTGTTCCAATGGGAAAGTGGATTCGAGGTACTTGTCTTTTCTTGGGAATTTGGATAGGGTTTCTGGTTTTTCTTGGGGTGCTGCTGTTATTGAAGATTTGTGTCAGTGGCTTGATAAGAGGAAAGACAACAATGTGCAGTATGTTGATGGTTGTCTCATATTTCTCCAAACATGGTCCTATGAGCATTTTGATATAGCACGGCCAAATTTGCAAGATCAAGATACGGCCTTTCCTCGTGTCTGTCGATGGGATCATAGTAAACCTCATCCAAGGCAACGAGGTACTGCAAGGTTTAAGGATCTACATGATGACCAGATAATTTGGAAACTCCAACCTACTTCTGGAGAGTTAAAAATAAACATAATAAAAGAAGCAGTGGAGTTACTAGGCGACGAGGTTAAAAGGGACGAAGATTATGCAGCAAGCACATCAAATAATGTTTCAGATGTGGATGCAGAAACGCAGCTTAGTATCTCTAGTAAAATACATAGAGACGACGAGGTTAATTTTGATAATCAGGTAGTAGAGGACACTCCCACAAGGTTGAGCACTTGTGATGAAGAGTATATAGAGCAGAACATCAATAATGAAAATCTGATAGTAGAGGAGACCCCCTCCAATTCGAGCATTGATGTTGAAGTAGGCAAAGAGGAGCAGTTCCAAGTAGACAAACTCATGGTGGAGGACTCCTTCACAAATTTGAACATATCTGAGGAAATAGATAGAGAAGTGTTGTACGCTGAAAATCACAGAATGGAGGACTCCCCCACAAATTTGAGCATTGAGGATGAAGTAGGAAGAGAGCAAGAGTGTAATGCTGAAACTCTCGTAGTGGACGTCACTCCCCCTAATTTCAGCTTTGATGATGATTTAAGGAAGAAAAATATCATGTTAGAAGCGGAAAATATTGAATTGAAGCTGAAAATAAGCCAACAAAACGAAGAAAGTATACAATTAAAAAAGGAGAATGACGAGTTGAATCAAAAGGTGACTATTGGGCAGCTGACTGTATATAATGTTATCTGTTTGTTAGGGGTTGTGTTAGTAGGTTTCTTTCTAAGTGAAACCATGAAATTCTTGCAGGTCATGCAGCTTCTACATTTCCATGGCGAGAAGGTATCCATAATGTGTGTTCAAGTAGAAGCTCTGTGTGGTAGCTTTGACACTGCTGCTGCGCGATCAACTTTTGCACAACACAAAAACAAACAGGTTTATGGTCTTTTTCATTACATGATTTGA 1737 0.4088 MRKSTRISSIGLGQATEPVVKNISTHFSLTAFANRVKHLTEEQSMAISRTGFGSLLSIPKQTLNKVFLTEVMEAWNSERQVFEIGSGEIGFSLLDVALILGLPVAGHRVELVEEELFSDLEEEYGATRAKRKVSMATLEARLDSIGKVVSDDFVRSFLLFTIGTFLCSNGKVDSRYLSFLGNLDRVSGFSWGAAVIEDLCQWLDKRKDNNVQYVDGCLIFLQTWSYEHFDIARPNLQDQDTAFPRVCRWDHSKPHPRQRGTARFKDLHDDQIIWKLQPTSGELKINIIKEAVELLGDEVKRDEDYAASTSNNVSDVDAETQLSISSKIHRDDEVNFDNQVVEDTPTRLSTCDEEYIEQNINNENLIVEETPSNSSIDVEVGKEEQFQVDKLMVEDSFTNLNISEEIDREVLYAENHRMEDSPTNLSIEDEVGREQECNAETLVVDVTPPNFSFDDDLRKKNIMLEAENIELKLKISQQNEESIQLKKENDELNQKVTIGQLTVYNVICLLGVVLVGFFLSETMKFLQVMQLLHFHGEKVSIMCVQVEALCGSFDTAAARSTFAQHKNKQVYGLFHYMI 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00800 578 PANTHER OS07G0283600 PROTEIN-RELATED 35 409 - -
Trre7g00800 578 Coils Coil 459 495 - -
Trre7g00800 578 Pfam Plant mobile domain 51 275 IPR019557 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00800 Trre-Chr7 5293405 5298298 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00800 - - tpra:123882005 817.379