Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00786 ATGTGGACTCATCAACTGCTACAACCACTGCCACCCCACAATCTCTTCCACTCATCATATTCACCTTCAAAACTTACAAAAAATTCATCTTTTGCAAAATTGAATTCGACCCATAACACAAAAACTCACAATGAAATTGTTAACTCAACAATAATAACTTTGGAAGATCTTCCTCCAAACGCTCTTCGTAGGAAGAAAGGAGAAGAATGGATTGGAGGGTTCTCCCTTGGTGTTGACTTGGGAATGGCTCGTACTGGTCTTGCTCTCAGCAAAGGCTACTCTGTTCGCCCATTAACAGTTTTGGAACTGCGAGGACAAAAACTCGAACTCCGGATTATGAACATTGCCGAACAAGAGGAAGCTGATGAGTTTATAATTGGACTTCCAAAATCTTCTGATGGAATGGAAACAACACAGTCAAACATAGTCCGTAGTGTTGCTGGAAGGCTTGCTGTTCGAGCTGCTGAGAGGGGTTGGAGAGTATATCTACAGGATGAATATGGAACGACAACAGCCGCCATGAATCGAATGGTCGACATGGGCTTGAGCAAGTTCACTAGGCAGAAGAAACTCGATGCCTATGCTGCCACGATGGTACTGGAGAGATATTTCTCCACATCAGGTCAGAAAGCTGAACTTGTTGTGCCCAAGAATCTTGAACTACAAGGAAAACTTAGAAAGGGTCCTCCAAAAGATGAAGATCTTTTCTCCGACGAAGATTAA 723 0.4302 MWTHQLLQPLPPHNLFHSSYSPSKLTKNSSFAKLNSTHNTKTHNEIVNSTIITLEDLPPNALRRKKGEEWIGGFSLGVDLGMARTGLALSKGYSVRPLTVLELRGQKLELRIMNIAEQEEADEFIIGLPKSSDGMETTQSNIVRSVAGRLAVRAAERGWRVYLQDEYGTTTAAMNRMVDMGLSKFTRQKKLDAYAATMVLERYFSTSGQKAELVVPKNLELQGKLRKGPPKDEDLFSDED 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00786 240 FunFam Holliday junction resolvase 75 212 - -
Trre7g00786 240 CDD YqgF 76 204 IPR005227 GO:0006364
Trre7g00786 240 PANTHER POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN 56 224 IPR005227 GO:0006364
Trre7g00786 240 Pfam Holliday junction resolvase 75 205 IPR005227 GO:0006364
Trre7g00786 240 Hamap Putative pre-16S rRNA nuclease [yqgF]. 73 208 IPR005227 GO:0006364
Trre7g00786 240 SUPERFAMILY Ribonuclease H-like 74 206 IPR012337 -
Trre7g00786 240 Gene3D - 75 213 IPR037027 GO:0006139
Trre7g00786 240 NCBIfam Holliday junction resolvase RuvX 76 204 IPR005227 GO:0006364
Trre7g00786 240 SMART rnase_8s 73 173 IPR006641 GO:0006139
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00786 Trre-Chr7 5181341 5185054 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00786 - - tpra:123920019 399.823