Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00785 ATGGCTCACCGTCAACTTATGGACTCACTCACTTCTCATATCTCCCTTTACCATTCCCAATCCCCAAACCCTAACCCTAACCCTAACCCTAGATCTTCCATTCTCAAATGGTTCTCTTCTCTCTCAATTCACCACCGTCTCTCTCATCTCACTATCCTCGATTCCAATTTCGTCCAAATCCTCCTTCAAATGCTTTCCAAACTTCAATCCAACAACAACCACGGTTGCTTCATCCTCCTCCCCGATCTTCCCTCTCGCGATCCGCCGTTCTTACCGACTCTCTGCTTCAAGAAATCACACGGTCTCATTGCTCGAATTGCGGATTCCGACACTGCTGGAAAATTGATCTTTGATTCGGTTCGACTTTTTGCTTCCAGGGAAGGGGAGAATGCTTCGAAATGTTCGTGTGATGCGAGGTGTCTTGATGCGGTGACGTTTTGTGAAGGGATTGTAGAGGATGTGGATAGATTTGTGGAGGTTATGGATAAGATTTCTGGTGGTGGATTTCTTAGAGGGGAAGAAAATGAGATTGGTGAGGATTGGGTTGAATTGAATTGGTTGAAATCGAAAGGGTATTACGGGATTGAGGCTTTTATTGCGAATAGGATCGAGGTTTCGATTAGGTTGGCTTGGTTGAATAGTTGTGGTGGGAAGAAAAGAGGTGTGAAATTGAAGGAGAAGTTGAATGTGGCTGGTCTTGCTGCTAATGTGTATTGGAGGAAGAAGGGTTGTGTGGATTGGTGGGGGAATTTGGATTCTGTTACAAGGAAGAAGGTGTTCAAAACGATTATCATGAAATCGGCTAAAGCTTTGACGTATGAGGTTTTGAAAGTGGCAAGCAGTGCTCCCGAAGATGAGGTTTGGCTATACAGGAGGGGAACGGGAGTTGATAAACTACTTGACTATAATTGTACTGGATCTGCTCAAAGGACCACCCGAGCATTTCGCGATGATACAGAGTTTGGCAGAATTATTACACCTGTCAGTGTTTGTAAAAGGCCTGCAGCTTTAGCTAGAGTCTTTGATTCCCTATCTGTGCTTCAAGACATTAACATAATGTTGACATCATGTATTAATAGTGAATATGATATAGGAACTCTTTTCTTTAGTTCGTTAGTTTCTGTCTCTACAATATCTGATTGTATATTAAGAAAATTGAGAGGTTTTCTGATGGTTATTTCACTTGATTGCACAAAACATGAGCTACTAGAGGAGGAACATGACAAATCCTCATCGGGTAAACCTAAGGAAAAACTTGGTCTTTCTAACCGTAAAAAGAAGGGACGGACCCGCAATAATAAAAGGCAAAATCCTGCGCCAAAGACACCTGTGAGCGGTATTTCATGCGAAAATCTTCATAAGGACGTTGATTGTGTAGTGGACAATAAAAAGAAGACTGATTTAACGAAACCCGGGGAACTTCCTCAAGTTCCTCCGGTAAAAAACGATATTTCTATGGAGAACTCCTCATCACCTGTAAAAATTGTAGATTGTACTCGAGAATCGAATGTTGGCAAACCTCGAACCACTCCAAGAAAAAGTAGAAAAGAGAAAAATAGAAATAAAAATAAAAGCACTCTTGTTGACAGTGCAGTTGTAGATTCTCACAAGTCAGTTACGCATGCTGCCTCTACCACTGTTGTTTCTAAAGGTGAGGTGGAAAAATGCAATAGGTCTTTTGATAGTTCTACCATTCAGAATGTCAAAAACAAAGGTTCTATTGGTAATGACATCCTTGTCTCAAATTCAATCCCTTGTTCTCTTAATGGACCTGCTAAGGAGAACAGCTCTACCGGGAAAGTTGAAGGAAAGAACGTTGATGATCTTGCTGAAAGTTGCAATAGTTCAGGTTCTCAGTTTTGTTTATCGCCAAATGAAAGGAAAATGTTGTCTTGTGAATTAGATACTCGCGTTGTAGAATGTAAAACTATAACACAACCTGTACCTGCATTGAAGCACAGTAATTTCTCCAGCAATGAAGATACATGTTCTTTGAACACCACAGGTGCTGCCACAGCTGACGTGAAGTCGACTATTTATGACAAACCAATTAGAGAGGTTAATGTAAAAGAATTTGGCATGTTGAAGGAGAGAGATAGATGTCTATTTGAAAGTAGAAATTCCGCTTTCTCAAAATGCAGTCCATATGAATGGCCGGGCATACCTTCTATCTATTTTCCATCTTTTAACTCGCATCTCCCTCCTGCAACAGACAGATTGCATCTGGATGTTGGACGCAATTGGCATAATCACTTTTGCCACCCATTTGTTCCCACATTACCACAAGCAAGAAATACACCAATTGAAGGTGGATGTAACCCAATTATGTCTCGTCAAATTCCTATGAGTTTTGACTGGCCCCCAGTTTTTCGTGGTGGTGTGACCCCATCACCAAATTGTAAATATGACTCTGGGTTTATGTCTAGGAGACAATGTAAATTTTCGAAAGGGTTGGCTGTTCACGGCATGCATCTTGATGTAACAACTTCTGATGATGAAAGGAAGTACTCTGGGGATACATTGGATTTACCTGACCTGATAAATACACAGTTCACAGATGAATATGACAACCTCTATGTATCAGAGGAAGAGTATGATTTCCATGCTGTTTCTGGTATAGATTATAATCAATATTTTGGTGGCGGTGTAATGTACTGGAACCCTTCCGAGCATTCAGGAAAAGGTTTTTCTCGGCCTCCCTCCCTCAGCTCTGATGACAGTTTATGGGCTTTGCGTGAAGCTGACATGAATCAGACAGTGGATGATATGGTTGCTTTCTCTTCTTCATATAGTACAAATGGTTTAGCATCACCAACTACTGCGACATTTTGCTCTCCCTTTGATCCTGTAGGGACTGGGCCCCAGACTGTTGGTTATGTAATGTCTAGTAATGATGTACCTGGGAAAGTGATGCATTCTTCATCAGTTACTGATGCCGCAGTGGATGATGATACTTCTTCTGGTTCTTTAGGTAATAACTTACCTGGAGAAATTGAAGGGAAGGCTGGTGATTCACATCCATATCCCATTCTACGGCCAATAATTATTCCTAACTTGTCAAGGGAAAGGTCTGTATGTGTTGATCATAAAAGCCCTTGTGTTCCTCCTACCAGGCGGGAGCAGCCTCGCATAAAGCGGCCACCATCACCTGTGGTGCTTTGTGTACCGCGCGCACCACGTCCTCCCCCACCCTCCTCTGTGAGTGACTCTAGGAAACAAAGGGGTTTTCCAACTGTTAGGTCTGGTAGTTCCAGCCCAAGACACTGGGGAATGAGAGGTTGGTATCATGATGGAAGTAATTTAGAGGATACTTGTTTAAGAATGGATGGTGCTGAAGTTGTGTGGCCTTCTTGGAGAGGTAAAAACCTTGCAGTGCAACCTCTGATCCAACCTTTACCTGCTGCCTTGCTGCAGGACCGCCTGATTGCAATGTCACAGATAGCACGCGACCAGGAACATCCGGATGTCACCTTACCTCTGCAACCTCCCGAGTTACGAAGCTCTTCTGCAACGAGTGCATCTTTATCTTCGATGCATGGAACGCTACATGATGAGATTGACTTTTTCTGTAAACAGGTTGCGGCAGAAAACATGGCAAGGAGGCCTTACATTAATTGGGCTGTCAAGAGAGTTACCCGATCTCTGCAGGTTTTATGGCCCAGATCCAGGACAAATATATTTGGTTCCAATGCCACTGGTATGGCTCTTCCAACAAGTGATGTTGACCTTGTGGTTTCTCTCCCTCCAGTGAGGAACCTGGAACCCATTAAAGAAGCTGGAATATTGGAAGGTCGTAATGGTATTAAAGAAACATGTCTTCAGCATGCAGCTAGGTACCTTGCCAATCAGGAATGGGTAAAAAATGATTCTCTGAAGACAGTGGAAAATACTGCTATACCTATTATTATGCTCGTGGTGGAAGTACCCGAGGATGTTATCACTTCATCAGCTCCTACGTTACATTCATTAAAAGAAAAGTCACATTGTACAACTGGTGAACATGGTAATGACAATCATTCGGATATGATCCAGCTAGAAGATTCAGCTTCGCTGAAAAGGTCTAAAACTAATTTTTATGCTTTGAAAGATTCCAAATCAGTTCGCGTTGACATCAGCTTTAAATCCCCATCACATACTGGACTCCAAACTACAGGAATGGTTAAGGAGTTGACGGAACAATTTCCTGCTGCTACTCCTCTTGCTTTGGTGCTAAAACAGTTTTTGGCAGATCGGAGCCTTGACCAGTCCTACTCCGGTGGCTTAAGTTCCTACTGTTTGGTATTATTAATTATACGTTTTCTTCAGCATGAGCACCATCTTGGCCGGCCAATCAACCAAAATTATGGAAGTCTTCTGGTGGATTTTCTTTACTTTTTTGGGAATGTGTTTGATCCTCGTCAAATGCGGATATCGGTGCAGGGAAGTGGACTTTATATAAAGAGAGAAAGAGGTTGTAGCATTGATCCAATTCACATAGATGACCCTCTTTTTCCAACAAATAATGTGGGAAGGAATTGCTTCCGAATACATCAATGTATTAAGGCATTTTCAGAAGCTTATTCTGTTCTTGAAAATGAACTCACATTCCTAAATGGTGATGGTGAGTCATGCTCAAGGCCATCTTACAGACTACTTCCAAAAATTATCCCAAGTCTTGATGTATCATAA 4668 0.4214 MAHRQLMDSLTSHISLYHSQSPNPNPNPNPRSSILKWFSSLSIHHRLSHLTILDSNFVQILLQMLSKLQSNNNHGCFILLPDLPSRDPPFLPTLCFKKSHGLIARIADSDTAGKLIFDSVRLFASREGENASKCSCDARCLDAVTFCEGIVEDVDRFVEVMDKISGGGFLRGEENEIGEDWVELNWLKSKGYYGIEAFIANRIEVSIRLAWLNSCGGKKRGVKLKEKLNVAGLAANVYWRKKGCVDWWGNLDSVTRKKVFKTIIMKSAKALTYEVLKVASSAPEDEVWLYRRGTGVDKLLDYNCTGSAQRTTRAFRDDTEFGRIITPVSVCKRPAALARVFDSLSVLQDINIMLTSCINSEYDIGTLFFSSLVSVSTISDCILRKLRGFLMVISLDCTKHELLEEEHDKSSSGKPKEKLGLSNRKKKGRTRNNKRQNPAPKTPVSGISCENLHKDVDCVVDNKKKTDLTKPGELPQVPPVKNDISMENSSSPVKIVDCTRESNVGKPRTTPRKSRKEKNRNKNKSTLVDSAVVDSHKSVTHAASTTVVSKGEVEKCNRSFDSSTIQNVKNKGSIGNDILVSNSIPCSLNGPAKENSSTGKVEGKNVDDLAESCNSSGSQFCLSPNERKMLSCELDTRVVECKTITQPVPALKHSNFSSNEDTCSLNTTGAATADVKSTIYDKPIREVNVKEFGMLKERDRCLFESRNSAFSKCSPYEWPGIPSIYFPSFNSHLPPATDRLHLDVGRNWHNHFCHPFVPTLPQARNTPIEGGCNPIMSRQIPMSFDWPPVFRGGVTPSPNCKYDSGFMSRRQCKFSKGLAVHGMHLDVTTSDDERKYSGDTLDLPDLINTQFTDEYDNLYVSEEEYDFHAVSGIDYNQYFGGGVMYWNPSEHSGKGFSRPPSLSSDDSLWALREADMNQTVDDMVAFSSSYSTNGLASPTTATFCSPFDPVGTGPQTVGYVMSSNDVPGKVMHSSSVTDAAVDDDTSSGSLGNNLPGEIEGKAGDSHPYPILRPIIIPNLSRERSVCVDHKSPCVPPTRREQPRIKRPPSPVVLCVPRAPRPPPPSSVSDSRKQRGFPTVRSGSSSPRHWGMRGWYHDGSNLEDTCLRMDGAEVVWPSWRGKNLAVQPLIQPLPAALLQDRLIAMSQIARDQEHPDVTLPLQPPELRSSSATSASLSSMHGTLHDEIDFFCKQVAAENMARRPYINWAVKRVTRSLQVLWPRSRTNIFGSNATGMALPTSDVDLVVSLPPVRNLEPIKEAGILEGRNGIKETCLQHAARYLANQEWVKNDSLKTVENTAIPIIMLVVEVPEDVITSSAPTLHSLKEKSHCTTGEHGNDNHSDMIQLEDSASLKRSKTNFYALKDSKSVRVDISFKSPSHTGLQTTGMVKELTEQFPAATPLALVLKQFLADRSLDQSYSGGLSSYCLVLLIIRFLQHEHHLGRPINQNYGSLLVDFLYFFGNVFDPRQMRISVQGSGLYIKRERGCSIDPIHIDDPLFPTNNVGRNCFRIHQCIKAFSEAYSVLENELTFLNGDGESCSRPSYRLLPKIIPSLDVS 1555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00785 1555 MobiDBLite consensus disorder prediction 482 497 - -
Trre7g00785 1555 Gene3D Beta Polymerase, domain 2 1196 1312 IPR043519 -
Trre7g00785 1555 MobiDBLite consensus disorder prediction 404 448 - -
Trre7g00785 1555 MobiDBLite consensus disorder prediction 1052 1066 - -
Trre7g00785 1555 MobiDBLite consensus disorder prediction 420 434 - -
Trre7g00785 1555 MobiDBLite consensus disorder prediction 1067 1085 - -
Trre7g00785 1555 Gene3D - 1352 1549 - -
Trre7g00785 1555 MobiDBLite consensus disorder prediction 466 527 - -
Trre7g00785 1555 PANTHER POLY(A) RNA POLYMERASE 500 1549 IPR045862 GO:0043631|GO:1990817
Trre7g00785 1555 SUPERFAMILY PAP/OAS1 substrate-binding domain 1395 1528 - -
Trre7g00785 1555 MobiDBLite consensus disorder prediction 404 419 - -
Trre7g00785 1555 SUPERFAMILY Nucleotidyltransferase 1185 1390 IPR043519 -
Trre7g00785 1555 MobiDBLite consensus disorder prediction 1028 1045 - -
Trre7g00785 1555 MobiDBLite consensus disorder prediction 1028 1087 - -
Trre7g00785 1555 Pfam Nucleotidyltransferase domain 1209 1252 IPR002934 GO:0016779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00785 Trre-Chr7 5165924 5176264 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00785 - - tpra:123920018 2681.36