Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00774 ATGGGACAAACAGTTTCTTCTGCTAAATCCTCAGCTTCTAAATTGTGGTGTTTCATCAATCCACGTTTTGCTTCTTCTGAATCTTTCACTCCATTTTATGGAAATTATGAAAAATTGAAATCACAAGAAGATTGTTTCAATCTCCAGATACATCCTCATGAGCTGCAATTTCCATTTGAATTGAAGAAGGAGATATCTTGCTCTTTGCAATTGTCTAACAACTCGGATAATTATTTGGCCTTTAAGGTTAACACTACAAATCCAAAGAAGTATTATGTTACGCCTAATATTGGAGCTGTGTTACCTAGGTCTACTTGTGATATTATAGTTACAATGCAAGCCCACAAGGAGGCACATCTTGACATGCAATGCAAAGATGAATTTGTCATTCAAAGCATAGTTGCAAATCACAAAAGATATCACTCCAAAAATGGAGCAACCACAAAAGATATAACTCCAGAAATGTTTAATAAAGAGTCCGGCTATGAGGTTGAAGAGTGTAAATTGAGAGTTGTCTATGTTGCTCCTCCTCAGCCAACCTCCCCAGTTCGAGAAGGATCTGATAACGATTGGAAAGCTTCCAATGAACACGTTGAACAGAAGAATACTTCATTTCAGATACATCCTCAGGAGCTTCAATTTCCATTTGAATTGAGGAAGCAGATATCATGTTCTTTACAGTTGTCTAACAAGTCAGATAATAATGTGGCTTTCAAGGTTCTGACTACAAATCCAAAGAAGTATTGTGTTAGGCCTAACAATGGAGTTGTGTTGCCTTGGTCTACTTGTGATATTATAGTTACAATGCAAGCCCAAAAGGAGGCACCTATTGGCATGCAATGCAAAGATAAGTTTCTCATTCAAAGCATAGTTGCAAATCACAAAAGTTATCACTCCAAAAATGGATCAACAACAAAAGATATCACTCCAAAAATGTTTAAAAATGAGTCCGGCTATAAGGTTGACGAGTGCAAATTGAGAGTTGTTTATGTTGCTCCTCCTCAACCACCATCCCCAGTTCAAGAAGGATCCGATGAAAAATCGTCTCCTCGAGCATCTGGCTTTTCAGATAATAAGTTTAATAAAAAGTCCGGCTATGAGGTTGAAGAGTGCAAATTGAGAGTTGTCTATGTTGCTCCTCCTCAGCCACCATCCCCGGTTCGAGAAGGATCTGATAAAGATTCGAAAGCTTCCAATGAACAGGTTGAACAGCAGGATACTTCACTTCAGATATATCCTCAGGAGCTGCAATTTCCCTTTGAACTGAGAAAGCAAATATCATGTTCTTTGCAGTTTTCTAACAAGTCAGATAATTATGTGGCTTTCAAGGTTAAGACTACAAATCCAAAGAAGTATTGTGTTAGGCCTAACATTGGAGTTGTGTTGCCTAGGTCTACTTGTGATATTACAGTTAAAATGAAAGGCCAAAAGGAGGCACCTCCTAACATGCAATGCATAGATAAGTTTCTCATTCAAAGCTTAGTTGCAAACTCTGGAGCAACCACAAAAGATATCACTCCAAAAATGTTTGAGAAAGAGTCTGGCTATGAGATTCAAGAGTGCAAGTTCAAAGTTGTTTACGTGCCTCCTCCTCAACCACCATCCCCAGTTCGAGAAGGATCTGACGAAGATTTGTCTCCTCGAACATCTGGCTTTTCAGATAAGGCAAGAGCACTTATTTCAAAGCTAACCGAGGAGAGGAATTCTGCTATTGAGAAAAATAAAAGGCTTGAGCAAGAACTGGTATGA 1749 0.3859 MGQTVSSAKSSASKLWCFINPRFASSESFTPFYGNYEKLKSQEDCFNLQIHPHELQFPFELKKEISCSLQLSNNSDNYLAFKVNTTNPKKYYVTPNIGAVLPRSTCDIIVTMQAHKEAHLDMQCKDEFVIQSIVANHKRYHSKNGATTKDITPEMFNKESGYEVEECKLRVVYVAPPQPTSPVREGSDNDWKASNEHVEQKNTSFQIHPQELQFPFELRKQISCSLQLSNKSDNNVAFKVLTTNPKKYCVRPNNGVVLPWSTCDIIVTMQAQKEAPIGMQCKDKFLIQSIVANHKSYHSKNGSTTKDITPKMFKNESGYKVDECKLRVVYVAPPQPPSPVQEGSDEKSSPRASGFSDNKFNKKSGYEVEECKLRVVYVAPPQPPSPVREGSDKDSKASNEQVEQQDTSLQIYPQELQFPFELRKQISCSLQFSNKSDNYVAFKVKTTNPKKYCVRPNIGVVLPRSTCDITVKMKGQKEAPPNMQCIDKFLIQSLVANSGATTKDITPKMFEKESGYEIQECKFKVVYVPPPQPPSPVREGSDEDLSPRTSGFSDKARALISKLTEERNSAIEKNKRLEQELV 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00774 582 ProSiteProfiles Major sperm protein (MSP) domain profile. 204 331 IPR000535 -
Trre7g00774 582 Pfam MSP (Major sperm protein) domain 206 296 IPR000535 -
Trre7g00774 582 Pfam MSP (Major sperm protein) domain 409 512 IPR000535 -
Trre7g00774 582 Pfam MSP (Major sperm protein) domain 48 139 IPR000535 -
Trre7g00774 582 FunFam Vesicle-associated protein 1-1 403 531 - -
Trre7g00774 582 MobiDBLite consensus disorder prediction 341 360 - -
Trre7g00774 582 Gene3D Immunoglobulins 42 178 IPR013783 -
Trre7g00774 582 Gene3D Immunoglobulins 401 532 IPR013783 -
Trre7g00774 582 Gene3D Immunoglobulins 197 335 IPR013783 -
Trre7g00774 582 MobiDBLite consensus disorder prediction 332 360 - -
Trre7g00774 582 ProSiteProfiles Major sperm protein (MSP) domain profile. 408 528 IPR000535 -
Trre7g00774 582 MobiDBLite consensus disorder prediction 531 553 - -
Trre7g00774 582 FunFam Vesicle-associated protein 1-1 42 177 - -
Trre7g00774 582 FunFam Vesicle-associated protein 1-1 199 334 - -
Trre7g00774 582 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 359 403 IPR016763 GO:0005789
Trre7g00774 582 Coils Coil 553 582 - -
Trre7g00774 582 MobiDBLite consensus disorder prediction 379 406 - -
Trre7g00774 582 ProSiteProfiles Major sperm protein (MSP) domain profile. 47 174 IPR000535 -
Trre7g00774 582 SUPERFAMILY PapD-like 43 189 IPR008962 -
Trre7g00774 582 SUPERFAMILY PapD-like 199 345 IPR008962 -
Trre7g00774 582 SUPERFAMILY PapD-like 402 542 IPR008962 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00774 Trre-Chr7 5099476 5105426 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00774 - - tpra:123924150 629.402