Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00772 ATGGCGAAACGCACCAAATCGGAAGAAGAGGGTACTTCAACATCATCATCGGAATCAGAACAAACCGTACGGAATGGGAGTACCATCTCAGAGTACGAGAAACAGAGACTGCAAAGAATTGCAGAAAACCAAGCAAGGTTGAAAGCTATGGGGTTACCCCAAATGGTCACTTCATTGAAAAAATCAACTCCGATTAAGAAGAAGAAGAAGGGAAAAGAAAAGGTTAAAGATGATGATGATGATGAAGAGTATAAACCCGAAAACGAGGAAGAACGAGAAGCTGACTCAGATTCAGATTCTTCTGGTGAAGAACAACATCAACATGATTCTGACTATGAAAATGCTTCTGGGTCACGGAAAAGAAAGGCGAAGACCAAAAATTTGAAGGTGAAAAATAGAGTAACTGGAAAGAAGCATAGTGGTAATTTAGATTATATTGATGATGAAGAGGCAGCTTTGATGCAGGCAATTGCTCTTTCCTTGCAAGATTCTGCAGAAGCTTCACTTTGCTCTAACAAGAATGTAGGGAACATCAACAAGGCTGAGAAAAATGAAAACATTCACATTCAAGAAGATAAGGGAAGAAAGAAGAACAAAAAATCGTTTGCTAGTCGGCTACAAATGACTGAGGATGAACTCATTGTACATTTCTTCCAACTTGATGAAGCAGGAAAAGGAACTGTAACAATAAGGGATTTAGAAAGAGCAGCTATAGCTCATGATTTTGCATGGACAGACAAAGAGTTGGTTGATATGATTCGCTGTTTTGATAGTGATAGAGACGGAAAGCTAAGCCTTGATGATTTTCGGAAGATTGTTGAACGTTGCAACATGATAAAAGGCTCAGAAAATTCTTGA 858 0.3881 MAKRTKSEEEGTSTSSSESEQTVRNGSTISEYEKQRLQRIAENQARLKAMGLPQMVTSLKKSTPIKKKKKGKEKVKDDDDDEEYKPENEEEREADSDSDSSGEEQHQHDSDYENASGSRKRKAKTKNLKVKNRVTGKKHSGNLDYIDDEEAALMQAIALSLQDSAEASLCSNKNVGNINKAEKNENIHIQEDKGRKKNKKSFASRLQMTEDELIVHFFQLDEAGKGTVTIRDLERAAIAHDFAWTDKELVDMIRCFDSDRDGKLSLDDFRKIVERCNMIKGSENS 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00772 285 MobiDBLite consensus disorder prediction 99 120 - -
Trre7g00772 285 Gene3D - 162 284 - -
Trre7g00772 285 SMART efh_1 248 276 IPR002048 GO:0005509
Trre7g00772 285 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 148 167 IPR003903 -
Trre7g00772 285 SUPERFAMILY EF-hand 203 274 IPR011992 -
Trre7g00772 285 MobiDBLite consensus disorder prediction 14 34 - -
Trre7g00772 285 MobiDBLite consensus disorder prediction 82 98 - -
Trre7g00772 285 MobiDBLite consensus disorder prediction 1 140 - -
Trre7g00772 285 ProSitePatterns EF-hand calcium-binding domain. 257 269 IPR018247 -
Trre7g00772 285 MobiDBLite consensus disorder prediction 121 136 - -
Trre7g00772 285 ProSiteProfiles EF-hand calcium-binding domain profile. 244 279 IPR002048 GO:0005509
Trre7g00772 285 Pfam EF-hand domain pair 212 273 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00772 Trre-Chr7 5096047 5098901 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00772 28 282 EF-hand Containing Proteins AT1G73440 41.797 3.34e-51 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00772 - - gmx:100806103 302.367