Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00745 ATGTCTAGTGAATCTGATGTATCCGTAAATACACTCTCTTGTGTTAATTGTGGGAAACCTGCGAATCTTCAGTGTCCAAAATGCATGGAATTGAAGCTTCCACGTGAAGGTTCTGCATTCTGCTCTCAGGAATGTTTCAAATCTTCCTGGAGTTCGCACAAATCAGTGCATCTGAAGGCAAAGCTTGGAACACAGAATTCAGACTCACTCGGTGAAGGATGGTTATATTGCTCGAAGAGAGGGCAGGGTCGAACTCCAAAGCTTCCTCACTTTGATTGGACTGGGGCGCTGCGGCCATATCCCATATCTGCTAAACGGATTGTCCCAACTCATATTGTTATACCTGATTGGGCCGATGATGGAATTCCCAAAGTTGAACCCATTAGTGACCTGCAGCATGTTGTTGAGATCAAGTCTCCAGATCAAATCGAAAGAATGAGAGAAACTTGTCGGATTGGAAGGGAGGTGTTGGATGCAGCTGCTCGGATTATTCAGCCTGGTGTGACAACTGATGAAATTGATAGAGTAGTTCACGAGGCAACTATCGCTGCAGGAGGATACCCTTCGCCTCTCAACTACCATTTCTTCCCGAAGTCTTGCTGCACGTCGGTTAATGAAGTGATCTGCCATGGAATTCCTGATGCAAGGAAACTTGAGGATGGCGACATTGTAAATGTTGACGTCACTGTGTATTATAAAGGTGTTCATGGTGATCTCAATGAAACATACTTTGTGGGAAATGTGGATGAAGAGTCTCGCCAGTTGGTCAAATGCACATATGAGTGCTTGGATAAGGCAATATCCATCGTTAAACCTGGTGTACGATTCCGTGAAATTGGCGAAGTTATTAATCGTCACGCCTCAATGTCAGGCTTCTCAGTGGTAAAATCATATTGTGGTCATGGAATTGGAGAGCTTTTCCATTGTGCACCAAACATTCCTCATTATGGAAGAAATAAAGCGGTTGGTGTGATGAAGGCTGGTCAGACCTTTACAATCGAACCAATGATCAATGCAGGTGTCTGGCGTGATAGAATGTGGCCAGATGGATGGACCGCTGTTACCGCAGATGGTAAACGAAGCGCTCAATTTGAGCACACTCTTTTGGTGACAGAAACTGGTGTTGAAGTTTTAACAGGGCGGTTGCAGACATCACCAAATGTTTTTCCTTGGTTAAATTCATAA 1185 0.4439 MSSESDVSVNTLSCVNCGKPANLQCPKCMELKLPREGSAFCSQECFKSSWSSHKSVHLKAKLGTQNSDSLGEGWLYCSKRGQGRTPKLPHFDWTGALRPYPISAKRIVPTHIVIPDWADDGIPKVEPISDLQHVVEIKSPDQIERMRETCRIGREVLDAAARIIQPGVTTDEIDRVVHEATIAAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDARKLEDGDIVNVDVTVYYKGVHGDLNETYFVGNVDEESRQLVKCTYECLDKAISIVKPGVRFREIGEVINRHASMSGFSVVKSYCGHGIGELFHCAPNIPHYGRNKAVGVMKAGQTFTIEPMINAGVWRDRMWPDGWTAVTADGKRSAQFEHTLLVTETGVEVLTGRLQTSPNVFPWLNS 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00745 394 Hamap Methionine aminopeptidase [map]. 135 381 IPR002467 GO:0006508|GO:0070006
Trre7g00745 394 PRINTS Methionine aminopeptidase-1 signature 222 238 IPR001714 -
Trre7g00745 394 PRINTS Methionine aminopeptidase-1 signature 323 335 IPR001714 -
Trre7g00745 394 PRINTS Methionine aminopeptidase-1 signature 200 213 IPR001714 -
Trre7g00745 394 PRINTS Methionine aminopeptidase-1 signature 292 304 IPR001714 -
Trre7g00745 394 FunFam Methionine aminopeptidase 91 387 - -
Trre7g00745 394 Pfam zf-MYND-like zinc finger, mRNA-binding 15 58 IPR031615 -
Trre7g00745 394 PANTHER METHIONINE AMINOPEPTIDASE 11 381 - -
Trre7g00745 394 CDD MetAP1 143 379 IPR002467 GO:0006508|GO:0070006
Trre7g00745 394 ProSitePatterns Methionine aminopeptidase subfamily 1 signature. 298 316 IPR002467 GO:0006508|GO:0070006
Trre7g00745 394 NCBIfam methionine aminopeptidase, type I 136 380 IPR002467 GO:0006508|GO:0070006
Trre7g00745 394 Pfam Metallopeptidase family M24 144 372 IPR000994 -
Trre7g00745 394 SUPERFAMILY HIT/MYND zinc finger-like 11 55 - -
Trre7g00745 394 Gene3D Creatinase/methionine aminopeptidase superfamily 91 390 IPR036005 -
Trre7g00745 394 SUPERFAMILY Creatinase/aminopeptidase 90 380 IPR036005 -
Trre7g00745 394 Gene3D - 5 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00745 Trre-Chr7 4871379 4876594 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00745 K01265 - gmx:100813779 761.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g00745 7 4871379 4876594 Trre7g00745 7 4871379 4876594 ECH