Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00727 ATGCTACTTTTTCTCTCTACAATGGCGATTCCAACTATTTCCCGCCTAAAATTCATTCCAAAACCTTTACTTTTCACATCTCTCCACAGAATTCAATTCCCGCACAAATATTCTACCCGCACCGTCTCTTGCATACAAAACCAAACTCCAAAACGCGACGGAGATATTGTCGTTTTGGGCATCGAAACTAGCTGCGACGACACTGCCGCCGCTGTCGTGAGAAGTGACGGTGAAATTCTGAGCCAGGTGATATCTTCTCAGGCAGATCTGCTTGTGAAGTATGGAGGAGTTGCTCCGAAAATGGCAGAAGAAGCTCACTCACAAGTGATAGACCAGGTTGTTCAAGAAGCCCTTGATAAAGCTTATATGACTGAGAAGGATCTTACCGCAGTTGCTGTTTCTATTGGTCCTGGTTTAAGTCTCTGCCTTCGTGTAGGGGTGCGCAAGGCTCGGAGAATTGCTGGAGGCTTTAATTTACCAATTATTGGCATCCATCACATGGAGGCTCATGCTCTAGTGGCTAGATTAATTGAGAAAGATTTGCAGTTTCCATTCATGGCCCTACTTATTTCAGGAGGGCATAATCTACTCATTCTTGCACGTGATCTTGGACAATACGTACAACTTGGAACTACAATAGATGATGCTATTGGTGAGGCTTATGACAAGTCAGCAAAATGGCTTGGACTTGATATGAGCAGAAGTGGCGGTCCTGCTATAGAGGAGCTTGCTAGAGAGGGCAATGCTAAATCAGTTAATTTCTCTATTCCAATGAGGCAGCATAAAGATTGCAACTTCTCCTATGCTGGTCTAAAAACCCAAGTAAGACTGGCAATTGAGTCCAAAAAGATTGATGCCAAAATTCATATTTCTTCTGCAAGTTATGAAGATCGATTGTCACGGGCTGATATTGCTGCTTCTTTTCAGCGAATTGCAGTGTTACATCTAGAGGAAAGGTGTGAGCGAGCAATTCAGTGGGCATTGAAGATGGAGCCTTCGATAAAACACTTGGTTGTCTCTGGTGGTGTTGCATCAAATCAATATGTTCGGGCACGGCTTGATACGGTTGTGAAGAAGAATGGCCTGCAACTTGTATGCCCTCCTCCTCGGCTTTGTACCGACAATGGTGTAATGGTTGCTTGGACTGGTATTGAGCACTTTCGCGTGGGAAGATATGACCCTCCACCTCCTGCAGAAGATCCAGAAGACTTCCAGTATGATATACGCCCAAGGTGGCCGTTGGGGGAAGAATATGCTGAAGGAAGAAGTGAAGCTCGCTCCGTAAGAACTGCACGTATTCATCCTTCTCTTACATCTCTAATTCAAGCATCGTTGCAACAATGA 1344 0.4472 MLLFLSTMAIPTISRLKFIPKPLLFTSLHRIQFPHKYSTRTVSCIQNQTPKRDGDIVVLGIETSCDDTAAAVVRSDGEILSQVISSQADLLVKYGGVAPKMAEEAHSQVIDQVVQEALDKAYMTEKDLTAVAVSIGPGLSLCLRVGVRKARRIAGGFNLPIIGIHHMEAHALVARLIEKDLQFPFMALLISGGHNLLILARDLGQYVQLGTTIDDAIGEAYDKSAKWLGLDMSRSGGPAIEELAREGNAKSVNFSIPMRQHKDCNFSYAGLKTQVRLAIESKKIDAKIHISSASYEDRLSRADIAASFQRIAVLHLEERCERAIQWALKMEPSIKHLVVSGGVASNQYVRARLDTVVKKNGLQLVCPPPRLCTDNGVMVAWTGIEHFRVGRYDPPPPAEDPEDFQYDIRPRWPLGEEYAEGRSEARSVRTARIHPSLTSLIQASLQQ 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00727 447 PANTHER TRNA N6-ADENOSINE THREONYLCARBAMOYLTRANSFERASE 54 420 IPR000905 -
Trre7g00727 447 FunFam Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial 189 367 - -
Trre7g00727 447 NCBIfam tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD 59 380 IPR017861 -
Trre7g00727 447 Pfam tRNA N6-adenosine threonylcarbamoyltransferase 78 381 IPR000905 -
Trre7g00727 447 PRINTS O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 151 IPR017861 -
Trre7g00727 447 PRINTS O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 209 230 IPR017861 -
Trre7g00727 447 PRINTS O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 59 72 IPR017861 -
Trre7g00727 447 PRINTS O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 152 171 IPR017861 -
Trre7g00727 447 PRINTS O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 186 198 IPR017861 -
Trre7g00727 447 PRINTS O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 337 346 IPR017861 -
Trre7g00727 447 Gene3D - 184 367 - -
Trre7g00727 447 NCBIfam tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD 58 387 IPR022450 GO:0002949
Trre7g00727 447 SUPERFAMILY Actin-like ATPase domain 58 381 IPR043129 -
Trre7g00727 447 Hamap tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 56 414 IPR022450 GO:0002949
Trre7g00727 447 Gene3D - 58 388 - -
Trre7g00727 447 FunFam Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial 58 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00727 Trre-Chr7 4769501 4774902 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00727 K01409 - gmx:100784367 735.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g00727 7 4769501 4774902 Trre7g00727 7 4769501 4774902 ECH